Shigella sp. PAMC 28760: A0259_18370
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Entry
A0259_18370 CDS
T04390
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0259_18370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shq03400
]
A0259_18370
Enzymes [BR:
shq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
A0259_18370
DNA repair and recombination proteins [BR:
shq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0259_18370
Prokaryotic type
A0259_18370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_8
HHH_5
DUF6308
Motif
Other DBs
NCBI-ProteinID:
AMR24474
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All DBs
Position
3713907..3714959
Genome browser
AA seq
350 aa
AA seq
DB search
MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP
TVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRS
TAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF
NQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPKQTLPERTGYFLLLQH
EDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLTQLTAFRHTFSHFHLD
IVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtcgcaattttcagcccaggttctggactggtacgataaatacgggcgaaaa
actctgccctggcaaattgacaagacgccctacaaagtatggctctcagaagtgatgttg
caacaaactcaggttgcgaccgttatcccctattttgaacgctttatggcgcgcttcccg
acggtgaccgatctcgccaatgcgccgctcgacgaagttctccacttgtggaccgggctt
ggctattacgcccgcgcgcgcaatctgcataaagcggcacaacaagtggcgaccttacac
ggcggtaaattcccggaaacctttgaggaagttgcagcactgccgggcgtcgggcgttcc
accgcaggcgcgattctctcgctttctctgggtaagcactttccgattctcgacggtaac
gtcaaacgggtgctggcgcgctgctatgctgtaagcggctggccagggaaaaaagaggtc
gagaataaattatggagtttgagcgagcaggtgacgcccgcggttggcgtggaacggttt
aatcaggcgatgatggatttgggtgcgatgatttgtacgcgctcgaaaccgaaatgttcg
ctctgtccgctacaaaacggatgtattgccgccgccaacaatagctgggcgctttatccg
ggcaaaaaaccgaaacagacgctgccggagcgcaccggctactttttgctattacagcac
gaagatgaagtattgctggcgcagcgtccgccgagcggattgtggggcggtttatactgt
ttcccgcagtttgccgacgaagaaagtttgcggcagtggctggcgcaacggcagattgct
gccgataacctgacgcaactgaccgcgtttcggcataccttcagccatttccacttagat
attgtgcctatgtggcttcccgtgtcgtcattcaccggctgcatggatgaaggcaatgcg
ctctggtataacttagcgcaaccgccgtcagttggcctggcggctcccgtggagcgtttg
ttacagcagttacgcactggcgcgccggtttag
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