Sarcophilus harrisii (Tasmanian devil): 100915871
Help
Entry
100915871 CDS
T02286
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
100915871
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100915871
03041 Spliceosome [BR:
shr03041
]
100915871
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100915871
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100915871
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100915871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
100915871
NCBI-ProteinID:
XP_031822196
LinkDB
All DBs
Position
4:complement(338472868..338475179)
Genome browser
AA seq
688 aa
AA seq
DB search
MSRDRFRTRGGGFHRRGGWRGGGLSHDFRSAPPGMAPSQNRGLLGPDPVQTGPRPSIPPP
PAQVSAQQQAQQAAAAVAAPVQQQQPASSPDPEPGLPPSSSPEPTVGTAAPASVSAPPPG
SGEPQGPGSATSQASSGPSAPPGEPQQTSSTPASVSPDLSGGPPPPPPDSSGPQPGASPG
GPKGKMPGGPRPGGPGLIPPGGHPNPPHRGGGEPRGGRQHHRPYHQQQQQQQQQQQPPPH
HQGPSPGGPAGGSEEKISDSEAFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKR
LFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSV
RNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGV
FLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKHPMYQKERENPPRFAQPGTFEFEYSQRWK
SLDEMERQQREQVEKNMKDAKDKLESEMEDASHEHQANLLRQDLMRRQEELRRMEELHNQ
EMQKRKERQLRQKEEQLRREEMIRQREMEEQMRRQKEESYSQMGYMDPRERDLRMGAGTM
NMGDPYGSGSQKFPPVGGGGIGYEANPGVPPTALSGSMKGNDMRTERFGQGGAGPVAGEG
PTGMGPGTPAGYGRGREEYERPNKKPRF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggaccggttccggactcgcgggggcggcttccaccggcgcggtggctggcga
ggaggaggcctaagccatgacttccgttcagcgccgccgggcatggccccgagccagaat
cgagggctgctggggccagacccggtccagaccggacctaggccttccatccctccgcct
ccggcgcaggtatcggcgcagcagcaagcgcaacaggcggcggcggccgtagcggccccg
gtgcagcagcagcaaccggcgtcgtccccggaccccgaaccggggctccctccgagcagc
agccccgagcccacagtgggcaccgccgcgccggcctccgtttccgcgccgcccccgggc
tcgggggaacctcaaggcccaggctcggcgacttcgcaggcctcatccggaccgtcggcc
cctcccggggagccgcagcagacctcttcaaccccagcctccgtgtcccccgacttgagc
gggggcccgcctcctccgcccccggactcctctgggcctcagcctggtgcgagccccggc
gggcccaaaggcaagatgcccggagggcccagacctggtgggccgggcctcattcctccc
ggaggacatccgaatccgccacaccggggcggcggggagccccgcgggggccggcagcac
caccggccgtaccaccagcagcagcagcagcagcagcagcagcagcagccgcctccccat
catcagggtccctcgcccggcggacccgcgggcggcagtgaagagaagatctcggactcg
gaggcttttaaagcaaatttgtccctattgaggagacctggagagaaaacttatacccaa
cgatgtaggttatttgttggaaatctgccagccgatattacagatgaagactttaaaaga
ttatttgctaagtatggagaacctggtgaagtctttatcaataaggggaaaggatttgga
ttcatcaaactggaatcgagagctttggcagaaattgccaaagcagaacttgatgataca
cctatgagagggcgacaacttcgtgttcgttttgccacgcatgctgcagccctctctgta
cgaaatctctcaccctatgtttccaatgaattattggaagaagcattcagccaatttgga
cctattgaaagggctgtggtaattgttgatgatcgaggaagatctacaggaaaaggcatt
gttgaatttgcttccaagccagctgcaagaaaagcatttgaaagatgcagtgaaggagta
tttttgttgacaacaactcctcgaccagtcattgtggaacctcttgagcagttagatgat
gaagatggtcttcctgaaaagcttgcccagaagcatccaatgtatcaaaaggagagagag
aaccctccacgttttgctcagcctggcacctttgagtttgagtattcccagagatggaag
tctttggacgagatggaaaggcagcagagggaacaagttgagaaaaacatgaaagatgca
aaagacaaactggaaagtgaaatggaagatgcatctcatgaacatcaggcaaatctttta
cgccaggatctaatgaggcgtcaagaagaactgagaaggatggaggaacttcacaatcaa
gaaatgcagaaacgcaaagaaagacagttaaggcaaaaggaagagcagcttagaagagaa
gaaatgattcggcagcgtgagatggaagagcaaatgagacgccaaaaagaagaaagttac
agtcagatgggatacatggatcctcgggagagagacttaagaatgggtgcaggaacaatg
aacatgggagatccctatggctcaggaagccagaaatttccacctgtaggtggtgggggt
ataggttatgaggccaatcctggagttccaccaacagccctgagtgggtccatgaaggga
aatgacatgcgtactgagcgctttgggcagggaggagctgggcctgtggctggggagggc
cctacaggaatgggacctggaactccagcaggatatggtagagggagagaagagtatgaa
cgcccaaacaaaaagccccgattttag
DBGET
integrated database retrieval system
