Sarcophilus harrisii (Tasmanian devil): 100917908
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Entry
100917908 CDS
T02286
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100917908 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100917908 (NRXN1)
Membrane trafficking [BR:
shr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
100917908 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
100917908
NCBI-ProteinID:
XP_031813031
LinkDB
All DBs
Position
2:complement(91091714..92450359)
Genome browser
AA seq
1522 aa
AA seq
DB search
MGTALLQRGGCFLVCLSLLLLGCWAELGSGLEFPGADGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPAVLLSDTPVNDGSWHTVRIR
RQFRNTTLLIDQTEAKWVEVKSKRRDMTVFSGLFVGGLPPELRVAALKLTLASVREREPF
KGWIRDVRVNSSQTLPVESGEVKLEDEPPSSGGGSPCEVGEEGEGGVCLNGGVCSVVDDK
AVCDCSRTGFRGKDCSQEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNP
IQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNG
KFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDF
FYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKC
ENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKNP
QMVKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNT
LRTPYTAPGESEILDLDDDLYLGGLPENKAGLIFPTEVWTALLNYGYVGCIRDLFIDGQS
KDIRQMAEIQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCE
REATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDA
GRVKLTVNLDCIRINCNSSKGPETLFAGNNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTG
QMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCEL
NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFI
VVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQS
TAGARNLDLKSDLYIGGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCN
GQIERGCEVALMKADLQGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGT
TYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQ
GKIGVKFNVGTDDIAIEEANAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDN
ERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKEQGHPFQGQLSGLYYNG
LKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTAR
RGKPPTKEPISQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRAGGRDYPGSAEVIR
ESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKE
KQPNSAKSSNKNKKNKDKEYYV
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgctgctccagcgtggggggtgcttccttgtatgcctctcactcctactt
ctagggtgctgggcagaactgggcagtgggttggagttcccaggggctgatggtcagtgg
acccgattccccaagtggaatgcctgctgtgagagcgagatgagtttccagctgaagaca
agaagtgcccggggcctagttctctattttgatgatgagggtttctgtgacttcttagag
ctgattcttacccgaggtggccggctgcagctcagtttttcaattttctgtgctgagcct
gcagtcctcttgtcggatacaccagtcaacgatggttcttggcacacggtgcggattcgc
cggcaattccgaaacacaactttgctcatcgaccaaacagaggccaagtgggtggaggtc
aagtccaagcgacgtgatatgacagtattcagtggtctctttgtgggtggcctgcctcca
gaactacgggttgcagcactcaagttgacattggcctcagtgagggagcgggaacccttt
aaagggtggattcgtgatgtgcgggtgaactcatcccagaccttgccagtggagagtggc
gaggtgaaactggaggatgagcctcccagtagtggtggggggagcccatgtgaggttggg
gaggagggcgagggaggcgtatgcctcaatggaggggtctgctccgtggtggatgacaaa
gcggtgtgtgactgctcccgaactggcttccgcggcaaggactgcagccaagaagacaac
tatgtggaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaaggaaaagaa
gaatatattgcaaccttcaaaggatcagaatacttctgctatgacttgtcccaaaatccc
atacaaagcagcagcgacgaaataaccttgtcatttaaaactcttcagaggaatggactg
atgcttcacacagggaaatcagctgattatgtcaatcttgctttgaaaaatggagccgtc
tccctggtcattaatttgggatcaggggcctttgaagcactagtggaacccgtgaacgga
aagtttaatgacaatgcctggcatgatgtgaaagtaaccaggaatctgcgtcagcactca
ggcattggacacgctatggtaaacaaactacattgttcggtgacaatatcagtggatgga
attcttaccacaacgggctacacccaagaagactataccatgctgggttctgatgacttt
ttctatgttggaggcagtcccagcacagcagacctcccagggtcgccagtcagtaacaac
tttatgggctgcctcaaggaggttgtatataaaaataatgatgtcaggctggaattatct
cggctcgccaaacaaggagatcctaaaatgaagatacatggagtagtggcatttaaatgt
gaaaatgttgcaacattggacccaatcacctttgagacaccagaatctttcatctctctc
ccaaagtggaatgccaagaaaacaggctccatatcatttgactttcgtaccacagaacct
aatgggcttatactctttagtcatggcaagccaagacaccagaaggatgccaaaaatccc
caaatggtaaaggttgacttctttgctattgaaatgctggatggccatctctacctgttg
ttggatatgggatcaggtactatcaaaataaaagctttgcaaaagaaggtgaatgatgga
gaatggtatcatgtggactttcagagagatggacgatcaggtaccatttccgtcaacaca
ttacgtacaccctacacagccccgggagaaagtgaaatcctagacctggatgatgacttg
taccttgggggtttgccagaaaacaaggcaggtctcatattcccaactgaagtatggact
gctcttctcaactacggctacgtgggctgcatcagggatttgttcattgatggtcagagc
aaagacatccgacaaatggctgagattcaaagcaccgctggagtcaagccttcttgctca
agagaaacagcaaagccgtgccttagcaacccatgtaaaaacaatggcatgtgtagggat
gggtggaacagatatgtttgtgattgttctgggacaggctaccttggcaggtcctgtgag
agagaggcaactgtcttgagttatgatggaagtatgtttatgaaaattcaacttcctgtg
gtgatgcacacagaggcagaggatgtgtccttaaggttccgatcacagcgggcctatggc
attctaatggcgaccacatctagagattctgcagatactcttcgcttggagctggatgca
gggcgtgtgaaactgacggtcaacctagattgtatcaggattaactgtaattccagcaaa
ggtcccgagaccctttttgctggcaataacctcaatgataatgagtggcacacagtacgt
gtggttcgaagagggaaaagtttaaagttaatggtggatgaccagcaagccatgacaggc
caaatggcaggagatcatacgaggctggaatttcacaacatagagactggaatcataaca
gagcggcggtatctgtcctctgtcccctccaatttcattggccacttacaaagcctgact
tttaatggaatggcatatattgacttatgtaaaaatggcgacatagactattgtgagcta
aatgccagatttggcttcaggaacatcatagcagatcctgttactttcaagaccaaatca
agttatgttgccttagctacattgcaagcatacacctctatgcatctttttttccagttc
aagacaacatccttagatggattgattttatataatagtggagatggaaatgactttatt
gtggttgaattagttaaagggtatttgcattatgtctttgatttgggaaatggtgctaac
ctcatcaaagggagctcaaataagccattgaatgacaaccagtggcacaatgtgatgatc
tccagggacaccaacaatctccacacagtcaagattgataccaaaatcaccacccaaagc
acagcaggagccaggaatttagatctgaaaagtgacttgtatataggaggagttgccaaa
gagatgtacaaatcattgccaaaattagtccatgcaaaggaaggttttcaaggctgcctg
gcatcagtggatttaaatggacggctccctgaccttatctctgatgctcttttttgcaac
ggacagatagaaagaggatgtgaagttgcattgatgaaagctgacttgcaagggccaagt
actacttgccaagaggattcctgttccaaccaaggagtatgcttgcagcagtgggatgga
ttcagttgtgactgcagcatgacctctttcagtggcccactatgcaacgaccctggaaca
acatatatctttagcaaaggtggtggacagatcacatacaaatggcctcctaatgaccgg
cccagtacacgtgcagacagactggccatagggtttagcacggttcaaaaagaagctgta
ctggtacgagtggacagttcttcagggctcggtgactacttagagctacatattcaccag
ggaaagattggagttaaatttaatgttggaacggatgacatcgccattgaagaggccaat
gctatcattaatgatgggaaataccatgtagtacgtttcacgaggagtggcggtaacgcc
acattacaggtggacagctggccagtgatcgagcgttatcctgcaggaaacaatgataac
gagcgcctggcgattgctagacagcgaattccatatcgacttggtcgagtagttgatgaa
tggctactcgacaaagggcgtcagctcacaatcttcaatagtcaagcaaccattataatt
ggcgggaaagagcagggccatcccttccagggccagctgtctggtctttactacaatggc
ttgaaagttctgaatatggcagccgaaaatgatgccaacatcgcgatagtgggaaatgtg
agactggttggtgaagtgccttcctctatgacaactgagtcaacagccacagccatgcag
tctgagatgtccacatccattatggaaaccaccaccaccctggctaccagcacagccaga
agaggaaagccccctacaaaagaacccattagccagaccaccgatgacatccttgtggct
tctgctgaatgtcccagtgatgatgaggacattgatccctgtgagccgagctcaggtggg
ttagccaacccgactcgagcaggtggcagagactaccccggctctgcggaagtgatccga
gagtcgagcagcacaacaggcatggtcgttgggattgtagccgctgccgccctgtgcatc
cttatcctcctttacgccatgtacaagtacaggaaccgagatgaaggctcataccacgta
gatgagagtcgaaactacatcagtaactcagcacagtccaacggggcagtcgtgaaggag
aaacaacccaacagtgctaaaagttccaacaaaaacaagaagaacaaggataaagagtat
tatgtctga
DBGET
integrated database retrieval system