KEGG   Sarcophilus harrisii (Tasmanian devil): 100926132Help
Entry
100926132         CDS       T02286                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:shr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    100926132 (LIG4)
Enzymes [BR:shr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100926132 (LIG4)
DNA repair and recombination proteins [BR:shr03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100926132 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
3
AA seq 911 aa AA seqDB search
MATSQASRTVASQVPFADLCSTLERIQKSKSRPDKIKYFKEFLDSWRKFHDAIHKNEKEV
TDSFYPAMRLILPQLERERMAYGIKETMFAKLYIELLNLPKEGKDAQKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCPQQGSLTIQQVNDVLDLIASSKSANRKDLVKKNLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQHTIFSLFHRDAAELHNVTTDLEKVCRELHDPSVGLSDISI
TLFSAFKPMLAAVADIQRIEKDMKHQSFYIETKLDGERMQMHKDGDVYKFFSRNGYDYTE
QFGDSSLQGSLTPFIHNAFKMNIQNCILDGEMMAYNPNTQIFMQKGNKFDIKKMVEDSEL
QTCYCVFDVLMVNNKKLGHETLRKRYEIIDSVFTPIKGRLEVVQKTEANTKKEVIDALNE
AIDKCEEGIVIKNPLSIYKPDKRGEGWLKIKPEYINKLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAETPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLSKHWKPFHKRTPPNSILC
GKEKPEVYIEPCNSVIVQIKAAEIVSSDMYKTDCTLRFPRIEKIREDKEWYECMTLSELE
NLRGKASGKLATKHLFIAGDDEEPQEKKRKAVKVKKAITIIEHLKAPDLSNINKISNVFE
DVEFCVMSGTDSHSKSSLENCIAELGGYIVQNPGPDTYCIIAGTENVRVKNIISSNKHDV
VKAEWLLECFKAKEHVPWQPCFMIHMCPSTKEHFAREYDCYGDSYFADTDLLQLKEVFSR
IKNVKENSPKEMSPVITDLEYRYSWDNSPLSMFRQCVIYVDMYAIINDLTTQIQGTRLSI
KALELRFYGAQVISCLEEGVSHVIVGEDHSRVEEFKAFRRTLKKKYKILQDLWVTDSLKE
GNLQEENCYLI
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggccacttcacaagcttcgcgaacagtagcatcacaggtaccctttgcagatttatgt
tcaactttagaacgaatacaaaaaagtaaatcccgtccagacaaaatcaaatactttaag
gaatttttagattcgtggcggaaatttcatgatgctattcataaaaatgaaaaagaagtc
acggactctttttatccagccatgagacttattcttccacaactggaacgagaaaggatg
gcctatggaattaaagaaaccatgtttgctaaactttatattgagctgcttaatttacca
aaagaaggaaaagatgctcagaaacttttaaattacagaacaccaactggaactcgtgga
gatgctggagactttgcaatgattgcatactttgtgttgaagccccggtgtccacagcaa
ggaagcttaaccatacagcaagtcaatgatgttttagacttaattgctagcagcaagtca
gccaatagaaaggatctggtaaagaagaaccttcttcagctcataactcagagttcagct
cttgaacaaaagtggcttatccgaatgattataaaggacttaaaactgggtgttagccaa
catactatattttctctttttcatagagatgctgctgagttgcataatgttacaactgat
ctagaaaaagtgtgcagggaacttcatgatccttcagttggactcagtgatatttcaatt
acattattttctgcttttaaaccaatgctagctgctgtggcagatattcagcgaattgaa
aaggacatgaaacatcaaagtttctacatagagacaaaactagatggtgagcgtatgcaa
atgcacaaagatggagatgtgtataaattcttttctcgaaatggatatgattacaccgaa
caatttggtgactcttcccttcaaggttctttaacaccatttattcataatgcattcaaa
atgaacatacagaactgtattcttgatggtgagatgatggcctataatcccaacacacaa
atatttatgcagaagggaaataagtttgatattaaaaaaatggtagaagattctgaacta
cagacatgttattgtgtttttgatgtgttaatggtcaataataaaaaattgggacatgag
accttgagaaaaaggtatgaaattattgatagtgtttttacaccaataaaaggtagacta
gaagtggtacaaaaaacagaggctaacactaaaaaagaagtcattgatgctttaaatgaa
gcaatagataaatgtgaggagggaattgtgattaaaaatccactttccatttacaaacca
gataaacgtggtgaaggatggttaaaaattaagccagagtatataaataagttaatggat
gaattggatattttaattgttggtggttattggggtaaaggttctcggggaggaatgatg
tctcattttttgtgtgcagtagcagaaacaccccctcctggtgaaaaaccttctgtattt
catactctttgtcgtgttggttctggatacactatgaaagaactatatgaccttggtttg
aaattatccaaacactggaaaccttttcataaaagaactccaccaaatagcatcttgtgt
ggtaaagagaaaccagaagtttatatcgagccttgtaattctgtcattgttcaaattaaa
gcagcagaaattgtcagcagtgatatgtataaaactgattgtacactacgcttccctcgc
attgaaaagataagagaagataaagagtggtatgagtgtatgactctgagtgaattagaa
aaccttagaggaaaagcatctggaaagcttgctactaaacacctttttatagctggtgat
gatgaagaaccacaggaaaaaaaacggaaagctgttaaggttaagaaagctattactatt
attgagcacttaaaagctcctgatctttctaacataaacaaaatttcgaatgtatttgaa
gatgtggaattttgtgttatgagtggaacagacagccattcaaaatccagtctggaaaat
tgcatagcggaattgggtggttatattgtacagaaccctggcccagacacatattgtata
attgcaggtactgagaatgtgagagtaaaaaatatcatctcttcaaacaagcatgatgtg
gtaaaggcagaatggctcttagagtgttttaaggccaaagagcacgttccatggcagcct
tgctttatgattcacatgtgtccatccacaaaagaacattttgcccgtgaatatgactgc
tatggggacagttattttgctgatacagatctgctacaactgaaggaagtattctcaaga
attaaaaatgttaaggagaatagtcctaaagaaatgtctccagtaattacagatttagaa
tatcggtattcttgggataacagccctctcagtatgttccgacagtgtgtcatatatgtg
gatatgtatgctattattaatgacctcacaacacaaatccagggaaccaggctgtccatt
aaagctttggagctgcgattttatggagcacaggttatttcatgtttagaagaaggagtg
tcccatgtaattgttggggaggatcacagtcgtgttgaggaatttaaagcttttcgtaga
actcttaagaaaaagtataaaatcttacaagatctttgggtcactgattctttgaaagag
ggtaatttgcaggaagaaaattgttacttgatctga

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