Sarcophilus harrisii (Tasmanian devil): 100928904
Entry
100928904 CDS
T02286
Gene name
SETDB1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X2
KO
K11421
histone-lysine N-methyltransferase SETDB1 [EC:
2.1.1.43
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00310
Lysine degradation
shr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
Metabolism
Amino acid metabolism
00310 Lysine degradation
100928904 (SETDB1)
Cellular Processes
Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100928904 (SETDB1)
Enzymes [BR:
shr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.43 histone-lysine N-methyltransferase
100928904 (SETDB1)
Chromosome [BR:
shr03036
]
Eukaryotic Type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100928904 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100928904 (SETDB1)
SSDB
Motif
Pfam:
SET
Pre-SET
MBD
DUF4537
Other DBs
NCBI-GeneID:
100928904
NCBI-ProteinID:
XP_003770007
Ensembl:
ENSSHAG00000012701
UniProt:
G3WHI2
LinkDB
Position
4
AA seq
1277 aa
MTSFPGCFGLGAAAAGMEPQEIAELQQAVVEELGISMEELRQFIDEELEKMDCVKQRKRQ
LAELESWVVQKETEVAHVDELFDEASRAVTNCETLVKDFYSKLGLQYRESSSEDEASKPT
EVIEIPDEDDDVLSVDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKTSSQDL
NKGALGQVPVELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGAGRKFKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGTGTQFKPLEPPRTPSLPAPTLSPQVADLESLESQLAQAR
KQVAKKSTSFRLGSVGSGHSSPTSPGLNEAVPGGKSAVGQTVRLTPGSATPGPTFPAFHG
MLERAPAEPSYRAPMEKLFYLPHACSHTCLTRVRPVSNAQYRGKNPLLVPLLYDFRRMTA
RRRVNRKMGFHVIYKTPCGLCLRTMNEIERYLFETSCDFLFLEMFCLDPYVLVDRKFQPY
KPFYYILDITHGQEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGWEFLVGCDCKD
GCRDKSKCACHQLTIQATACTPGGQINPNSGYQHKRLDECLPTGVYECNKRCKCNINMCT
NRLVQHGLQVRLQLFKTQNKGWGIRCLDDIARGSFVCIYAGKILTDDFADKEGLEMGDEY
FANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKD
EDFSTSSVWRSYATRRQTRGQKENGTSETASKDSRPTDSGTPHLSAPQTSMGGCKPPSSE
DTPKNKVATWLSCNNVSDSSFADSDSRSSFRTSEGGDGRAGVGRGDGEKPSVSGLGVKEE
GDIKAPKKEESDEQSKIVLSSEGSRTFGYNPSPLKTEGIKGPPSKTNIHQARRLVAPAQA
NPDDVLTLSSSTESEGESGTSRKPVAGQAPATAADSDDIQTISSGSDGEDYEDKKNLSGP
IKRQVAVKSTRGFALKSTHGIAIKSTNMASADKGESVPVRKNTRQFYDGEESCYIIDAKL
EGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEG
KELLCCCGAIECRGRLL
NT seq
3834 nt
+upstream
nt +downstream
nt
atgacctcttttcctgggtgttttggtttgggtgctgctgcagctgggatggaacctcag
gagattgctgagctgcagcaagctgtggtggaggagctgggcatctctatggaagaactt
cgacagtttattgatgaggaattagaaaagatggattgtgtaaaacagcgcaagagacaa
ctcgctgagctggaatcctgggtggttcagaaagagactgaggtcgcccatgttgatgag
ctctttgatgaagcatccagggcagtgactaactgtgaaactctggtgaaagatttctac
tccaaattggggctgcagtatcgagagagcagttctgaagatgaagcttctaaacccaca
gaagtaattgagattcctgatgaggatgatgatgtcctcagtgttgattcaggtgatgca
ggcagtagaaccccaaaggaccagaagcttcgagaagctatggctgccctgaggaagtca
gcccaagatgtccaaaagttcatggatgctgtcaacaagaagactagttctcaggacctg
aacaaaggggccttgggtcaagtccctgttgagttgagtaaggacggtgacctggttgtc
agcatgagaatcctgggcaagaaaaggaccaagacatggcacaaggggaccctcattgcc
atccagacagttggggctgggaggaagttcaaagtcaaatttgacaacaaagggaagagc
ctgttgtctgggaaccatattgcctatgactaccaccctccagcagacaagttgtatgta
ggcagccgtgtggtggccaagtataaggatgggaatcaagtctggctctatgctggcatc
gtagctgagactccaaatgtcaaaaacaaactcaggttcctcatcttctttgatgatggc
tatgcatcctatgtcacacagtctgagctctatcccatctgcagaccattgaagaagact
tgggaggacattgaggatatttcctgcagagacttcattgaagaatatatcactgcctac
cccaaccgtcctatggtactccttaagagtgggcagctcataaagactgaatgggaaggc
acttggtggaagtcgcgtgtggaagaggtggatggcagtcttgtcaagatcctgttcctg
gatgacaagcgctgtgaatggatctatcgaggctctacccgactagagcccatgttcagc
atgaagacatccacagcttccaccctggagaagaaacaaggggggcagcttcggacacgc
ccaaacatgggtgctgtaaggagcaaaggtcccgtggtacagtatactcaagatctcact
ggtactggaacccagttcaagcccctagaaccacctcgcactccctctttgcctgcccct
actctgtcccctcaggtggctgatttggagagtctggagagtcagctcgcccaagcacgg
aagcaagtggccaaaaagagtacatctttccggctaggttctgtgggctctggtcattca
tcccctacatcccctgggcttaacgaggcggtccctggcgggaagtctgcagttggccag
acagtgagattaacaccaggctctgcgacccctggcccaactttcccagcttttcatggc
atgctggagcgggctccagctgaaccctcctatcgggcccccatggagaagcttttctac
ttgccgcacgcctgtagtcacacctgcctcacccgagtgaggccggtgagcaacgcacag
taccggggcaagaaccccctgttggtccctctgctctatgactttcggcgcatgacggcc
cggcgccgggtcaaccgcaagatgggctttcacgttatctataaaacaccctgcggcctt
tgcctgaggacgatgaatgagattgaacgctacctctttgagacaagctgtgatttcctt
ttcctggagatgttctgtttggacccttatgttcttgtggatcggaaattccagccctat
aagcctttttactacatcctggacatcacccacggccaggaggatgttcctctctcgtgt
gtcaacgagattgataccacccccccgccacaggtggcctacagcaaggagaggatccca
gggaaaggtgtcttcatcaacacgggctgggagttcctcgttggctgtgactgcaaggat
ggttgtcgggacaagtctaaatgtgcttgccaccaacttactatccaggcaacagcctgt
actcccggaggccagatcaaccctaactctggctaccagcataagagactagatgagtgc
ctgccgacaggggtatacgaatgtaacaagcgctgcaaatgtaacatcaatatgtgcaca
aaccgcttggtacaacatgggctacaggtccgactgcagctcttcaagacccagaacaag
ggctggggcatccgttgtttggatgacatcgccagaggctcctttgtctgtatatatgca
ggcaaaatcctgactgatgactttgcagacaaggagggtctggaaatgggggatgagtac
tttgcaaacctggaccacattgaaagtgtggagaactttaaggaaggctatgaaagtgat
gccccctgctcctctgacagcagcggggtggacttgaaggaccaagaggatggcaacagt
ggtaccgaggaccctgaagagtccaatgatgacagttcggatgacaacttctgcaaagat
gaggattttagtaccagttcagtctggcgcagctatgccacccggcggcagacaagaggc
cagaaagagaatgggacatcggagacggcttccaaggactcccgccccactgactcgggg
accccccacctttctgcccctcagacttctatggggggttgtaaacctccttcctctgag
gacacgcccaagaacaaagtagccacatggctaagctgcaacaatgtcagtgacagtagc
tttgctgactcagatagccgctcctccttcaggaccagtgaaggtggagatgggagggct
ggggtaggccgtggggatggagagaagccctccgtctcagggttaggggtcaaagaagag
ggggatatcaaggcacccaagaaagaggagtctgatgaacagagcaagattgtgttgtct
agtgaaggttccaggacttttggatacaacccatcccccttgaagactgagggtatcaag
ggcccacctagcaagaccaatatacatcaggcccggaggcttgtggcgcctgcacaagcc
aatcctgatgatgttctgacattatccagcagcacagaaagtgagggggagagtgggaca
agccgaaaacctgtagctggtcaggctccagccacagcagctgacagtgatgacatccag
accatctcctctggctctgatggcgaggattatgaagacaagaagaacctgtctggccca
atcaaacggcaggtggctgtgaaatctacacgaggttttgctttaaaatcaacacatggc
attgctataaagtcaaccaatatggcgtctgcagacaagggtgagagcgtgcctgttcgc
aagaatacacgccaattctatgatggcgaggagtcttgctacatcattgacgccaagcta
gaaggcaacctgggccgctatctgaaccacagctgcagtcccaacctgtttgtccagaat
gtcttcgttgacacccatgaccttcgtttcccctgggtggctttctttgccagcaagagg
atacgagctgggacagagctgacctgggactataactatgaggtgggcagcgtggaggga
aaggagcttttgtgctgttgtggagccatagaatgtcgaggacgacttctttaa
DBGET
integrated database retrieval system
