Sarcophilus harrisii (Tasmanian devil): 100928904
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Entry
100928904 CDS
T02286
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X5
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00310
Lysine degradation
shr01100
Metabolic pathways
shr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100928904 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100928904 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100928904 (SETDB1)
Enzymes [BR:
shr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100928904 (SETDB1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100928904 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100928904 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
100928904
NCBI-ProteinID:
XP_023359319
Ensembl:
ENSSHAG00000012701
LinkDB
All DBs
Position
4:426199429..426227049
Genome browser
AA seq
1152 aa
AA seq
DB search
MRMMMSSVLIQLREAMAALRKSAQDVQKFMDAVNKKTSSQDLNKGALGQVPVELSKDGDL
VVSMRILGKKRTKTWHKGTLIAIQTVGAGRKFKVKFDNKGKSLLSGNHIAYDYHPPADKL
YVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLK
KTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVKIL
FLDRIRPLSLLPRHQDDKRCEWIYRGSTRLEPMFSMKTSTASTLEKKQGGQLRTRPNMGA
VRSKGPVVQYTQDLTGTGTQFKPLEPPRTPSLPAPTLSPQVADLESLESQLAQARKQVAK
KSTSFRLGSVGSGHSSPTSPGLNEAVPGGKSAVGQTVRLTPGSATPGPTFPAFHGMLERA
PAEPSYRAPMEKLFYLPHACSHTCLTRVRPVSNAQYRGKNPLLVPLLYDFRRMTARRRVN
RKMGFHVIYKTPCGLCLRTMNEIERYLFETSCDFLFLEMFCLDPYVLVDRKFQPYKPFYY
ILDITHGQEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGWEFLVGCDCKDGCRDK
SKCACHQLTIQATACTPGGQINPNSGYQHKRLDECLPTGVYECNKRCKCNINMCTNRLVQ
HGLQVRLQLFKTQNKGWGIRCLDDIARGSFVCIYAGKILTDDFADKEGLEMGDEYFANLD
HIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFST
SSVWRSYATRRQTRGQKENGTSETASKDSRPTDSGTPHLSAPQTSMGGCKPPSSEDTPKN
KVATWLSCNNVSDSSFADSDSRSSFRTSEGGDGRAGVGRGDGEKPSVSGLGVKEEGDIKA
PKKEESDEQSKIVLSSEGSRTFGYNPSPLKTEGIKGPPSKTNIHQARRLVAPAQANPDDV
LTLSSSTESEGESGTSRKPVAGQAPATAADSDDIQTISSGSDGEDYEDKKNLSGPIKRQV
AVKSTRGFALKSTHGIAIKSTNMASADKGESVPVRKNTRQFYDGEESCYIIDAKLEGNLG
RYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLC
CCGAIECRGRLL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgatgatgtcctcagtgttgattcagcttcgagaagctatggctgccctgagg
aagtcagcccaagatgtccaaaagttcatggatgctgtcaacaagaagactagttctcag
gacctgaacaaaggggccttgggtcaagtccctgttgagttgagtaaggacggtgacctg
gttgtcagcatgagaatcctgggcaagaaaaggaccaagacatggcacaaggggaccctc
attgccatccagacagttggggctgggaggaagttcaaagtcaaatttgacaacaaaggg
aagagcctgttgtctgggaaccatattgcctatgactaccaccctccagcagacaagttg
tatgtaggcagccgtgtggtggccaagtataaggatgggaatcaagtctggctctatgct
ggcatcgtagctgagactccaaatgtcaaaaacaaactcaggttcctcatcttctttgat
gatggctatgcatcctatgtcacacagtctgagctctatcccatctgcagaccattgaag
aagacttgggaggacattgaggatatttcctgcagagacttcattgaagaatatatcact
gcctaccccaaccgtcctatggtactccttaagagtgggcagctcataaagactgaatgg
gaaggcacttggtggaagtcgcgtgtggaagaggtggatggcagtcttgtcaagatcctg
ttcctggacagaatccggcctctctcccttctcccccgacatcaggatgacaagcgctgt
gaatggatctatcgaggctctacccgactagagcccatgttcagcatgaagacatccaca
gcttccaccctggagaagaaacaaggggggcagcttcggacacgcccaaacatgggtgct
gtaaggagcaaaggtcccgtggtacagtatactcaagatctcactggtactggaacccag
ttcaagcccctagaaccacctcgcactccctctttgcctgcccctactctgtcccctcag
gtggctgatttggagagtctggagagtcagctcgcccaagcacggaagcaagtggccaaa
aagagtacatctttccggctaggttctgtgggctctggtcattcatcccctacatcccct
gggcttaacgaggcggtccctggcgggaagtctgcagttggccagacagtgagattaaca
ccaggctctgcgacccctggcccaactttcccagcttttcatggcatgctggagcgggct
ccagctgaaccctcctatcgggcccccatggagaagcttttctacttgccgcacgcctgt
agtcacacctgcctcacccgagtgaggccggtgagcaacgcacagtaccggggcaagaac
cccctgttggtccctctgctctatgactttcggcgcatgacggcccggcgccgggtcaac
cgcaagatgggctttcacgttatctataaaacaccctgcggcctttgcctgaggacgatg
aatgagattgaacgctacctctttgagacaagctgtgatttccttttcctggagatgttc
tgtttggacccttatgttcttgtggatcggaaattccagccctataagcctttttactac
atcctggacatcacccacggccaggaggatgttcctctctcgtgtgtcaacgagattgat
accacccccccgccacaggtggcctacagcaaggagaggatcccagggaaaggtgtcttc
atcaacacgggctgggagttcctcgttggctgtgactgcaaggatggttgtcgggacaag
tctaaatgtgcttgccaccaacttactatccaggcaacagcctgtactcccggaggccag
atcaaccctaactctggctaccagcataagagactagatgagtgcctgccgacaggggta
tacgaatgtaacaagcgctgcaaatgtaacatcaatatgtgcacaaaccgcttggtacaa
catgggctacaggtccgactgcagctcttcaagacccagaacaagggctggggcatccgt
tgtttggatgacatcgccagaggctcctttgtctgtatatatgcaggcaaaatcctgact
gatgactttgcagacaaggagggtctggaaatgggggatgagtactttgcaaacctggac
cacattgaaagtgtggagaactttaaggaaggctatgaaagtgatgccccctgctcctct
gacagcagcggggtggacttgaaggaccaagaggatggcaacagtggtaccgaggaccct
gaagagtccaatgatgacagttcggatgacaacttctgcaaagatgaggattttagtacc
agttcagtctggcgcagctatgccacccggcggcagacaagaggccagaaagagaatggg
acatcggagacggcttccaaggactcccgccccactgactcggggaccccccacctttct
gcccctcagacttctatggggggttgtaaacctccttcctctgaggacacgcccaagaac
aaagtagccacatggctaagctgcaacaatgtcagtgacagtagctttgctgactcagat
agccgctcctccttcaggaccagtgaaggtggagatgggagggctggggtaggccgtggg
gatggagagaagccctccgtctcagggttaggggtcaaagaagagggggatatcaaggca
cccaagaaagaggagtctgatgaacagagcaagattgtgttgtctagtgaaggttccagg
acttttggatacaacccatcccccttgaagactgagggtatcaagggcccacctagcaag
accaatatacatcaggcccggaggcttgtggcgcctgcacaagccaatcctgatgatgtt
ctgacattatccagcagcacagaaagtgagggggagagtgggacaagccgaaaacctgta
gctggtcaggctccagccacagcagctgacagtgatgacatccagaccatctcctctggc
tctgatggcgaggattatgaagacaagaagaacctgtctggcccaatcaaacggcaggtg
gctgtgaaatctacacgaggttttgctttaaaatcaacacatggcattgctataaagtca
accaatatggcgtctgcagacaagggtgagagcgtgcctgttcgcaagaatacacgccaa
ttctatgatggcgaggagtcttgctacatcattgacgccaagctagaaggcaacctgggc
cgctatctgaaccacagctgcagtcccaacctgtttgtccagaatgtcttcgttgacacc
catgaccttcgtttcccctgggtggctttctttgccagcaagaggatacgagctgggaca
gagctgacctgggactataactatgaggtgggcagcgtggagggaaaggagcttttgtgc
tgttgtggagccatagaatgtcgaggacgacttctttaa
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integrated database retrieval system
