Stereum hirsutum: STEHIDRAFT_46901
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Entry
STEHIDRAFT_46901 CDS
T03127
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
shs
Stereum hirsutum
Pathway
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_46901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_46901
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
STEHIDRAFT_46901
Spliceosome [BR:
shs03041
]
Complex C
Other components
Step II factors
STEHIDRAFT_46901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
AAA_16
T2SSE
Motif
Other DBs
NCBI-GeneID:
18804797
NCBI-ProteinID:
XP_007298024
JGI:
Stehi1_46901
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MASDDLYNLELLSLVSKITQEINNHTGLSDKTLAEFVISLHDQCKTLPEFKQKLKDVGAD
FPESFIENMDRLILSMHPKHKKKTAKSKGKKGKGNGAVDEQDKQKRLFPGLALADQDWQP
SISKDALMKEVDDMMSQFESTSKKSRPRPIDDEPSPKRQRRSPSPRRRSPSPPRGRSYDR
RDDRGGHSRGAVDERAVLYKVYDGKVSGMKDFGAFVTLEGVAGRAEGMVHVTNIQAGARI
NSPSDLLSRGQPVKVKVMSVAGNRIGLSMKDVDQATGRDLTPHLRIKSEAELIEEEREAA
RRASSGANAVPLNIKDEPVRSAKRLTSPERWEIKQLISSGIIDASEYPDLDEDFANPMVR
AEVEEELDVEIREDEPAFLRGQTKRTLDLSPVKIVKAPDGSLNRAALAGASLAKERRELR
QQEANELADSEARDFNAPWLDPMSKESDKVFAQDLRGTLRDEKASQNQGWRDKTFNKATT
FGEITSLSIQDQRKSLPIYKLRDALLQAVNDHPVLIVVGDTGSGKTTQMTQYLAEAGYAD
KGKIGCTQPRRVAAMSVAKRVAEEVGCRLGQEVGYTIRFEDCTSPETRIKYMTDGMLQRE
CLIDPDLSNYSIIMLDEAHERTISTDVLFGLLKKAIKRRPDLKLIVTSATLDAEKFSKYF
FGCPIFTIPGRTFPVEILYTKEPESDYMDASLITVMQIHLSEPRGDILLFLTGQEEIDTA
CEILYERMKALGPKVPELLILPIYSALPSEVQSRVFEPTPPGARKVVIATNVAETSLTIP
GIYYVIDPGFSKQNAYDPRLGMDSLVVMPISQAQARQRSGRAGRTGPGKCYRLYTEAAYR
NEMLPNSIPDIQRTNLSHTILMLKAMGINDLLSFDFMDPPPAQTMLTALESLYALSALDD
EGLLTRLGRKMADFPMEPPLAKMLIASVELGCSEEILSIVAMLSVQSVFYRPKEKQGQAD
SKKAKFHQPEGDHLTLLTVYNGWKGANYSNPWCYENFIQARSMRRAQDVRKQLLGIMDRY
KHDILSAGKDYNRVRRAICSGFFRNAAKKDPQEGYKTLVEGTPVYIHPSSALFNRNPEWC
IYHELILTTREYCHNVTAIEPKWLVDVAPQFFKVADANKISKRKKQEKIEPLYNKYEKPD
EWRLSKVKRNARSSQTFG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgacgatctctataatctcgaacttctttctcttgtctccaaaattacacag
gagatcaacaatcacacaggcttaagcgacaagactcttgccgagtttgtcatctccctc
catgaccagtgcaaaacactcccagagttcaagcaaaagctcaaggatgttggtgccgac
ttccccgaatccttcatcgagaacatggaccgactcattttgagcatgcacccgaagcac
aagaagaagacggccaagtcgaaggggaagaaggggaagggcaatggggctgtggatgaa
caggacaagcagaaacgtctgttcccggggcttgcacttgcggaccaggactggcaacct
agtatctcgaaggatgctttgatgaaggaggtcgacgatatgatgtcacaattcgagtct
acttcgaagaagtctcgaccaagacccatcgacgacgaaccatctcccaaacgacaacga
cgctccccatcacctcgacgccgtagccccagtcctccgaggggtcgctcatatgatagg
agagacgaccgagggggccatagtaggggcgcagtagacgagagagccgtgctttacaag
gtttatgacggcaaagtgtcgggtatgaaggattttggtgcattcgtaacgttggaaggt
gttgctggaagagcagaaggtatggttcatgtcacgaacatccaggctggtgctcgtatc
aattctccatccgacctcctcagtcgtggtcaacctgtcaaggtcaaagtgatgagcgtc
gccggcaatcgtatcgggctctccatgaaggacgttgaccaggccaccggtcgcgatctt
acacctcatcttcgtatcaaatctgaagccgaacttatcgaggaggaaagggaagcggca
cgcagggcatcttccggagcgaacgctgttcctctaaatatcaaagacgagcctgtccga
tctgcgaaacgcctcacgtcacccgaacgatgggagatcaagcaactcatttcttcggga
attatcgacgcttcggagtaccccgacctggatgaggacttcgcgaatccgatggttcgt
gcggaagttgaagaggaattggatgtcgagattcgtgaggacgaaccagctttccttcgc
ggacaaaccaagcgcacgctcgacctcagccccgtcaagatcgtcaaggcgcccgacggt
tcactcaatcgcgctgctctcgctggcgcctcattggcgaaggaacgccgtgagctgcga
cagcaagaggccaatgaactcgctgattcggaagcccgtgatttcaacgccccgtggttg
gaccctatgtcgaaggagtcggacaaggtctttgcccaggaccttcgtggcacgcttcgg
gacgagaaagctagtcagaatcaaggatggagggacaagactttcaacaaagcgacgact
ttcggagagattacgagtctaagcattcaagatcagaggaaatcgttgcctatctataag
ctacgagatgctctgttgcaagccgttaacgaccatcctgtcctcatcgttgttggtgac
accgggtcagggaagaccacccaaatgacgcaatatctagcggaggcgggctacgccgac
aagggcaagattggttgcacccagcctcgtcgtgtcgccgccatgtccgtcgcaaaacgt
gtcgccgaagaggtcgggtgtcgtttgggtcaagaagtcgggtacaccattcgttttgag
gactgcaccagccctgagacccgtatcaagtacatgacggacggtatgcttcagcgagag
tgtctcatcgaccccgatttaagcaactattccatcatcatgttggatgaggctcacgaa
cggacaatttctacggacgtgctcttcggtcttttaaaaaaggcaatcaaacgacgtccc
gacctcaagctgatcgtaacttctgccaccctggatgccgaaaaattctccaagtacttc
tttggatgtcccatcttcacaatccccggtcgaaccttccccgtcgaaattctttacacg
aaggaacccgaatccgactacatggacgcctctctcatcacggtcatgcaaatccacttg
tctgagcctcgaggcgacattcttctcttcctcaccggtcaagaagagatcgatacagcg
tgcgagatcctatacgaacgcatgaaggcgttgggcccgaaagtcccggagctgctcatc
ctccctatctactctgctctgccttctgaagtccagtccagggtctttgaaccgacaccc
cctggcgcgcgtaaagtcgtcatcgccacgaacgtcgccgaaaccagtcttaccatccct
ggcatttactacgttatcgaccccggattttccaaacaaaacgcgtacgatccacgcctt
ggtatggactcgctcgtcgtcatgcccatctctcaggcacaagcacgtcaacgctcaggg
cgcgcaggacgtaccggaccaggcaaatgctaccggctttataccgaggcagcttaccgg
aacgagatgttacccaattccattcccgatatccagcggacgaacttgtcacacactatt
cttatgctcaaagctatgggtatcaacgaccttctcagcttcgacttcatggaccctcct
ccggcgcaaaccatgcttaccgccctcgagtcgctatacgccctttcagctctcgacgat
gagggtcttcttacgcgtctaggccgtaagatggcagatttccctatggagcctcctctg
gctaagatgctcatcgcatcggttgaattggggtgctccgaggagattctgtccattgta
gccatgctttccgtccagagcgtcttctatcgtcccaaggagaaacaagggcaggcggac
tcaaaaaaggccaagttccatcagcctgagggagaccatttgactctgttaacggtgtac
aacgggtggaaaggtgcgaactactccaacccgtggtgttacgagaacttcatacaagcg
aggagcatgaggcgagctcaggatgtcagaaagcagcttttgggaatcatggaccgatac
aagcacgatatcctatcggctggcaaggactataaccgtgtgcgacgtgcgatatgctca
ggtttcttccgaaatgccgcgaagaaagatccacaggagggatacaagaccctcgttgaa
gggactccggtctacattcacccgtcctcagccctgttcaatcgtaatcccgagtggtgc
atctaccacgaattgattctcaccactcgagagtactgccacaacgttacggccatcgaa
ccgaagtggcttgtggacgtcgcccctcaattcttcaaggttgcggatgcgaataagatc
agtaagcggaagaagcaggagaagattgagcctttgtacaacaagtacgagaagccagat
gagtggcgtctgtcgaaggtcaagcgcaatgccaggtccagtcagacctttggttga
DBGET
integrated database retrieval system
