Stereum hirsutum: STEHIDRAFT_63608
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Entry
STEHIDRAFT_63608 CDS
T03127
Name
(RefSeq) RNA polymerase II-associated protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_63608
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
STEHIDRAFT_63608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_16
TPR_8
TPR_12
TPR_14
TPR_7
TPR_11
TPR_6
ANAPC3
TPR_9
Alkyl_sulf_dimr
DUF6057
Motif
Other DBs
NCBI-GeneID:
18806061
NCBI-ProteinID:
XP_007307765
JGI:
Stehi1_63608
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MSLQPWNTAPGRSIDIELGGQEVINIELDTLDANADDVVEVLKEGRPKVSVWTRLAGEYL
RRGHLDAAEKIAKDAVACFTEPGTTHPPSLPPLYSLLANIELAKARRAPKMKLANARQDI
MTQEKSRDEHMREATRYLNECEKTCNQEGIPPSQLFMLTRATYQLSNRSLDDALREFEAI
LSAYPRNLIALMGKARILYARRQFAMSLKAFQQVLQLNPSCLPDPRIGIGLCLWALNHKE
QAKAAWQRSIEVNPSEWSAHVLLGLEALNTSKSPLLSEAERAHEIMTGTKLIESAFKANQ
RNAAAANALCDIFLRKGQYKRALKLAERTIQFADTVTLLNEGYIRAGRVCHSEGSYDDAT
KHFKVAASGMPKNVLAAIGLAQMQMRNDEIPGAIHTLDTLLQPPNPQRSLEATVMLASLR
AHPRPGVSSSDAASEKIRARELFDRVAKAIEQGNDQHALATSNGRQNGHSAQSHQPSRLV
ANDIQMHIEVAKLWQNESLDRTGKAFSEALKISEASRGEDPRLLNNLGVLAHLEGKTDVA
RGWYERALTGVSALSGSAAGVKGADGEAMSTSILYNLARMYEDVGEHTMAGEAYDKLLER
HPEYVDAKIRQAHMLSHLNKQNEAHDLLKQCLTSQPSNLNLRSYYTYFLILSNSTKLARD
FVFATLKDHDKHDVYALCACAWVHYHIARENRDTSTKGVEERRKFFSRSSEFYVKALEMD
PTCAVAAQGLAIVTAEDALGSLGGSLPPGPQPDDALRRGQNAREALEVFAKVRESMDDGS
VYVNMGHCYYARDEYDRAIECYETASRRYYSGQNVPALQCLCRSWYGKANKDQSFVAMNT
ALTYAQKALHIQPSDKSILYNIAMIQQKAAEMLFSIQPAKRTLKDLQRAIQQAGHAQKLF
ATLAADPSSVVPYNKDIADQRRKYGESMLRKQDEHLKQQREYEEGVRMKLDTARQRRQEE
KERHEAVARERVDALRKEAEDLAEQRRKAREEAKEWSKNVQMESDDERERKAKKAANRKV
KSEVVSADEGANGEGAPKKKRVRKVKKEKGATSGKEGSDAEDGALFSGGEEAEKPVKKVR
DRTKKRVIRDDEDEEPDSAPSRKKQYKSKEIISSSDEEMS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcaaccatggaacacagcaccgggtcgctcaattgatattgagctcggagga
caagaagtcatcaacattgaacttgatactctcgatgcaaatgccgacgatgtcgtcgag
gtactcaaagaaggtcgaccgaaggtcagcgtctggacgcgtctcgcaggggaatacctc
cgaagagggcatttggatgcagcggagaagattgcgaaggatgctgtagcttgtttcaca
gaacctggaacgactcatcctccgtcattgccacctctctattccctgctggcaaatatc
gaacttgccaaggctcggagagctcccaaaatgaagcttgcgaacgctcgtcaggacatt
atgacccaggaaaagtcgagagacgagcacatgcgagaagcgactcgatacctcaacgaa
tgcgaaaagacgtgtaatcaagaaggcattccaccatcacaactattcatgctcactcgc
gctacatatcagctctcgaaccggtctcttgacgatgcgttacgggagtttgaagccatc
ctatctgcctatcctaggaatttgattgcactgatgggcaaggctcgaatattatatgct
cgacgtcaattcgccatgtctctgaaggccttccaacaagttctccaactgaatccatca
tgtctccctgaccctcgtatcggtattggtctttgtctctgggccttgaaccataaagag
caggcaaaggcagcttggcagcgcagcattgaagttaacccctctgaatggtccgctcac
gttctcctaggcctcgaggccctcaatacgagcaaaagtcctttattgtcggaagctgaa
cgcgcccatgagatcatgactggtacgaaattgattgaaagcgctttcaaagcgaaccag
aggaacgcggctgccgcaaacgcgctgtgcgatatttttcttcgtaagggccagtacaaa
cgagctctcaaactggccgaacgaactattcaattcgcagacacagtgacgctcctgaat
gaaggctatattcgcgccggtcgtgtctgccattcggagggctcctatgacgatgccaca
aaacacttcaaggtcgctgcaagcggcatgccgaagaacgtcctcgcggctatcggtctt
gcccagatgcagatgcgcaacgatgaaatacccggcgccatccatactctcgataccctt
ctccaacctccgaatccccaacgctccctcgaggcaaccgtcatgcttgcttccctccgt
gctcatccacgacccggtgtttcatcatctgacgcagcgtctgaaaaaatccgtgctcgc
gagctcttcgatcgtgtggctaaggccatcgaacaagggaatgaccaacatgccctcgcc
acctccaatggccgtcagaacggtcattcagctcaatcccatcaaccttcaagactggtc
gcgaacgatatacaaatgcatatcgaggtcgcgaagttgtggcagaacgagagtctggac
aggacagggaaggctttctcggaggcgttgaagatcagtgaggcgtcgcggggtgaagat
ccaaggttgttgaataaccttggggtgttggcacatttagagggaaagacggatgtggcg
agggggtggtacgagagggctttgacgggtgttagtgcgcttagcggttcggcagctggt
gtgaagggtgcggatggggaggcgatgtcgacaagcatcctctataacctggcgaggatg
tacgaggatgtaggtgagcatactatggcgggtgaagcgtatgataagctgttggaaaga
catccggaatatgtggatgctaaaatccgacaagcacacatgctctcacatctgaacaag
caaaacgaagcccacgacctcctgaaacaatgtctcacctcccagccttccaacctcaac
ctccggtcctattatacttacttcctcatcctctccaactctaccaaactcgcccgtgac
ttcgtcttcgctaccttgaaggatcacgacaagcacgacgtctacgcgctctgcgcctgc
gcatgggtgcactaccacatcgcgcgcgagaatcgcgacacctcgaccaaaggcgtcgag
gagcgtcggaagttcttcagccggagctcggagttctacgtgaaggcgctggagatggac
ccgacttgtgcggtggcggcacaagggttggcgatagtgacggcagaggacgcgttgggg
agtcttgggggcagtttgccaccggggccacaaccggatgatgcgctgcggaggggacag
aatgcgagggaggcgttggaggtgttcgcgaaggtgagggagtcgatggatgatgggagc
gtgtacgtgaatatgggccattgttattacgcaagggacgagtatgatagggcaatcgaa
tgctacgagacggcgtcgagacggtattatagcggtcaaaacgtcccggcgctacagtgc
ttgtgtcggtcgtggtatggcaaggccaacaaagaccagtcattcgttgcgatgaacacc
gctctcacatacgcccagaaggccctccacatccaaccttccgacaagtccatcctctac
aacatcgccatgatccaacaaaaagcggccgaaatgctcttctccatccagcccgcgaag
cgtaccctgaaagacctccagcgcgcaatccaacaggccgggcacgcccagaaactcttc
gccacgctcgctgcggacccttcgtctgtcgtcccgtacaacaaggatatcgcggaccag
aggaggaagtatggtgagagtatgttgaggaagcaggacgaacatttgaaacagcagagg
gaatacgaggagggggtgaggatgaagttggatactgcgagacagaggaggcaagaggag
aaggagaggcatgaggccgttgcgcgtgaacgtgttgatgccctacggaaggaagccgaa
gacctggcagaacagcgccgcaaggctcgtgaggaagccaaggaatggagcaagaacgtg
cagatggagtctgacgacgagagggaacgaaaggcgaagaaggcggccaataggaaggtc
aagtcggaggtcgtgagcgcggacgaaggcgccaacggcgagggggcaccgaagaaaaag
agggtgaggaaggtgaagaaggaaaaaggcgcgacgagtggtaaggagggctccgatgcg
gaggatggggctctgttttcgggtggcgaggaggcggagaagccggtgaagaaggttcgt
gatcgcacgaagaagcgtgttattagggatgacgaagacgaagagcctgatagtgcgccc
tcacggaagaaacagtacaaaagcaaggagatcatttcttcgtccgatgaagagatgtca
taa
DBGET
integrated database retrieval system
