Sphingobacterium sp. ML3W: KO02_06420
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Entry
KO02_06420 CDS
T03258
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht00300
Lysine biosynthesis
sht00470
D-Amino acid metabolism
sht00550
Peptidoglycan biosynthesis
sht01100
Metabolic pathways
sht01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KO02_06420
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KO02_06420
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KO02_06420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KO02_06420
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sht01011
]
KO02_06420
Enzymes [BR:
sht01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
KO02_06420
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
KO02_06420
Peptidoglycan biosynthesis and degradation proteins [BR:
sht01011
]
Precursor biosynthesis
Amino acid ligase
KO02_06420
Racemase
KO02_06420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AIM36372
UniProt:
A0A088EY27
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All DBs
Position
1442840..1445281
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AA seq
813 aa
AA seq
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MYTIADISEIVAPQRSIIVAHESIIQNLIYDTRKIMNAETGLFFALVNRRDGHDFIMDAY
RKGVRNFVLQNDLQQELVLTDANILWVPDTFLALQAIAAFQRKKFKSPVLGITGSNGKTI
VKEWLFQLLSPEYKIYRSPKSYNSQLGVALSLWELNEQYNFAIIEAGISEVGEMARLEKM
IKPTHGVLTNIGVAHREGFQSKEEKIDEKLKLFTDAEVLVYPQKYLEHVYMPSQIYKFAW
GDEESCQLEVYSLKKEDNQSTLVSLCFSRQIFTVKIPFVDQASIENAISCIGVMITFGYD
VKVIAERIATLQPMEMRLELKKGKQNSSIIDDSYSNDLVALQIALDFLKQQKQHLRKILI
LSDIPGVQVKDEKTFGKLKRLISESGLTELIFIGPVLGQLVSQFTLPITNYADTKSFLED
LKHINYSDATILIKGARDYHFEQISKRLVAKSHDTTLEINLNALEHNLNVYRGLLPPGVK
LMAMVKAFSYGSGSFEIANLLQFNHVDYLTVAFTDEGVDLRNGGITLPIVVMSPDENAFD
AIVQHRLEPEIYSFRILNSFIRYLKQHDLKGFPVHIKVDTGMHRLGFMPEEIEALLAVLK
NQEVIRVQSVFSHLASAGNVVDDKFTGNQIQLLDEFTAQLKQELGYSFIRHIAATSGIAL
WPSAYFDMVRLGIGLYGIDLEREDLPVKEVSVLKTNVTQIKQLSATETIGYNRAGVIHRP
SRIATIKIGYADGYDRRFGNGVGKMSINGQIVATVGNICMDMCMLDVTDIEVNEEDEVIV
YPDIKEAALAIGTIPYELLVNISQRVKRVYFYE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtataccatagcggatatttcggagattgtagcacctcaaagatcgattattgtagcc
catgaatccatcattcaaaatttgatttatgatacgcgtaagatcatgaatgcagaaaca
ggtttgttttttgcattggtcaaccgtagggatgggcatgatttcatcatggatgcttac
agaaaaggtgtccgaaactttgtcttgcaaaatgatctacaacaggagcttgtattgact
gatgccaatatcttatgggtgccagatacatttttggccttacaagcgatagctgctttt
caaagaaagaaattcaaatctccagtcttgggaataacggggagcaatggtaaaaccatt
gtcaaagaatggttattccaattattgtctcctgaatacaagatctaccgtagtcccaaa
agctacaactcacaattaggggttgcattatcactttgggagttaaatgagcagtataac
tttgccatcatagaagcgggtatcagtgaagtaggcgaaatggctaggttggaaaaaatg
attaaacccacgcatggtgtattgaccaatattggtgttgcgcatagagagggcttccaa
tccaaagaggaaaaaattgatgaaaaattaaaactctttacagatgcggaagtattggtc
tatccgcagaaatatttggaacatgtctatatgccttctcagatttataaatttgcttgg
ggtgatgaggagtcctgccaattggaagtgtattccctaaaaaaggaagacaatcaatcg
accttggtcagtttatgtttttcacgtcagatctttactgtaaaaattccttttgtcgat
caagcttccattgaaaatgccatttcttgcattggggtgatgattacctttggatatgat
gtaaaggtaattgctgaacgtatcgcaactttacaaccaatggagatgcgtttggagttg
aagaaagggaaacagaacagttccattatcgatgattcttatagtaatgatttagtggcg
ttgcaaatcgcattggattttttaaagcaacagaagcaacacttgcgtaagatcctgatt
ctatcggatattccaggtgttcaggtaaaggatgaaaagacatttggtaaattgaaacgc
ttgatttcggagagtggattgaccgagttgatttttataggaccggtcttaggtcaattg
gtttctcagtttacattgccgataacaaattatgcagacacaaaatcatttcttgaagac
ctcaagcatatcaattatagcgatgctacgattctgattaaaggtgctcgggattaccac
ttcgagcagatcagtaagcggttggtagcaaaatcgcacgatacgaccttagaaattaat
ctcaatgcgctcgagcataacctcaatgtatatcgcggattattgcctccaggtgttaaa
ttaatggctatggtgaaggctttttcctatggtagtggaagttttgaaatcgctaattta
ttgcagtttaatcatgtggattacttaacagttgcgtttacggatgagggggtggatcta
aggaatggaggcattaccttgcctatcgtggtgatgagcccagatgagaatgcttttgac
gcgatagtgcagcacagattggaacccgaaatctatagttttagaattttgaactctttt
attcgttatctaaagcaacatgatttgaagggatttcctgttcatatcaaagtagatacc
ggaatgcaccgattgggatttatgcccgaggaaatagaggcattgctagctgttttaaaa
aatcaagaagtgattagggtgcagtccgtattctcacatcttgcttctgcaggaaatgtt
gtcgatgataagtttactggaaatcagattcagttgttggacgagtttacggctcagtta
aaacaggaattaggctattcatttattcgtcatatagccgcaacttctggaattgcttta
tggccttcggcttattttgacatggtccgcctgggaattggtctttatggaatagacttg
gaaagagaagacttgcccgtgaaggaagtgagtgtgctgaaaacgaacgttacacagata
aaacaattgtcggctacggagaccatagggtacaatcgagcaggagtaatacatcgacct
agtcgtattgcaacgattaagattggttatgccgatggttatgatcgtcgttttggaaat
ggggtagggaagatgtccattaatggacaaattgtagctacagtaggcaatatctgtatg
gatatgtgcatgttggatgtcacagatattgaagtcaacgaagaagatgaagttattgta
tatcctgatataaaagaggcagctttggccattgggaccataccgtatgaattgttggtc
aatatctcgcaacgggtgaaaagagtttatttttacgagtaa
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