Sphingobacterium sp. ML3W: KO02_19905
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Entry
KO02_19905 CDS
T03258
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KO02_19905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sht03019
]
KO02_19905
Enzymes [BR:
sht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KO02_19905
Messenger RNA biogenesis [BR:
sht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KO02_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AIM38709
UniProt:
A0A088F1M0
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All DBs
Position
complement(4464522..4465955)
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AA seq
477 aa
AA seq
DB search
MSDNLQHPIFPIIKELAEKTNTECYVIGGYVRDRIMGRPFNNDVDIVVVGSGIEFATALG
NKLKSKVAVYKSFGTAMLVYEGLNVEFVGARKESYRSDSRKPIVEDGTLEDDQNRRDFTI
NAMAFSLNKHNYGQLLDPFNGVKDIELGTMRTPLDPIVTFSDDPLRMMRAIRFATQLNFK
IDVKAIQAITDTKERIRIISKERIIDEINKIILSKKPSIGFKYLFDTGLLPLVFPAMQNL
YGVDIIEGKGHKDNFYHTLEVLDNVCETTDDLWLRWAAIMHDIAKPATKRFDKKLGWTFH
GHEDKGARMVPKLFAELKLPLNEKMKFVQKLVLLHLRPIVLAQDIVTDSAVRRLLFEAGN
DIDALMQLCHADVTTKNEYKKKKYRQNFELVKQKLKDVEERDQIRNWQPPISGEDIMEVF
GIGPGREVGKMKNAIREAILEGEIPNAKIEAYHFMVNKAEDLGLTIRKAWDLNTTVK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatttacaacatcctatttttccaatcattaaagagttagccgagaaaaca
aatacggagtgctacgtcattggcggttatgtgcgcgatcgtattatgggacggcccttt
aataatgacgtagatattgttgttgtaggaagtggaattgaatttgctacagctttaggg
aataagttgaaatctaaagttgctgtctacaaaagttttggaacagcaatgctagtttat
gagggcttaaatgtcgaatttgtgggggctcgtaaagagtcctatcgcagtgattccaga
aaaccaattgtagaagatggcacgttggaagatgatcaaaatcgtcgcgattttaccatc
aatgcaatggcattttcgttgaataaacataattatggacagcttttggatccatttaat
ggagtcaaagatattgaattgggtaccatgcgtacaccattagatcctattgttactttt
tcggacgatcctttgcgtatgatgcgtgcgattcgttttgccactcagttgaattttaaa
attgatgtcaaagctattcaagcaattacagatacgaaagaacgtattcgtattatctcc
aaagaacggatcattgatgaaattaataaaataattttgtcgaaaaagccttctattggt
tttaaatatctatttgatactggccttttgccattagttttccctgcaatgcaaaacctt
tacggtgtcgatatcatagaggggaaaggacataaagataatttctaccatactttagaa
gttttggataatgtgtgcgaaactacagatgacctatggttaagatgggcggctatcatg
cacgatattgccaaaccagcgaccaagagatttgacaagaagctaggatggacatttcat
ggccatgaagataaaggagctagaatggttcctaaattatttgcagagcttaagcttccg
ttgaatgaaaaaatgaagttcgttcaaaaacttgttctattgcatttaagaccaatagta
ttggcacaagatatcgttactgattctgctgtacgccgattactttttgaagcaggcaat
gatattgatgccttgatgcaattgtgccatgccgatgtaacgacaaaaaacgaatataaa
aagaagaagtaccgtcagaatttcgaattggttaagcaaaagcttaaagatgtcgaggaa
cgcgatcaaatccgaaattggcagcctccgatttcaggagaagatattatggaagtattt
ggtattggtccaggacgtgaggtaggtaaaatgaaaaatgctattcgcgaagcaattttg
gaaggtgaaatacctaatgccaagattgaagcctatcattttatggtcaataaagcagaa
gatttaggcttgactattagaaaggcatgggatttgaatacaactgttaaataa
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