Shewanella sp. W3-18-1: Sputw3181_0045
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Entry
Sputw3181_0045 CDS
T00453
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03030
DNA replication
shw03410
Base excision repair
shw03420
Nucleotide excision repair
shw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sputw3181_0045
03410 Base excision repair
Sputw3181_0045
03420 Nucleotide excision repair
Sputw3181_0045
03440 Homologous recombination
Sputw3181_0045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shw03032
]
Sputw3181_0045
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_0045
Enzymes [BR:
shw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sputw3181_0045
DNA replication proteins [BR:
shw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sputw3181_0045
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Sputw3181_0045
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sputw3181_0045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABM22898
UniProt:
A0A6N3IZR6
LinkDB
All DBs
Position
complement(57192..59960)
Genome browser
AA seq
922 aa
AA seq
DB search
MPTIANNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAV
VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIHALGLPLISIPGVEADDVIGT
IARQASRENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPDEVAAKYGVGPDRIIDFL
ALMGDKADNIPGLPGVGEKTALAMLTGAGSVANLLAAPEKVSDLGFRGAKTMAAKITENA
DMLRLSYELATIKTDVELEQDWHELTAKPADRDELIKCYSEMEFKRWLAEVLDNKAPTTV
VADAAKVETQESSMPNPALETQYDTILTETQLDEWIAKLKQASLIAVDTETTSLDYMVAE
LVGMSFAVEAGKAAYLPLAHDYVGAPQQLDKQFALEKLRPILEDDKVKKVGQNLKYDISV
LANAGIKLQGVVFDTMLESYVFNSVASRHDMDGLALKYLGHKNIGFEDIAGKGAKQLTFN
QIPLEVAAPYAAEDADITLRLHQHLWPRLEKEPQLASVFTEIELPLIQVLSDIERQGVLI
DSMLLGQQSDELARKIDTLEEKAYEIAGEKFNLGSPKQLQVLFFEKLGYPITKKTPKGAP
STAEEVLVELALDFPLPKVILEHRSLSKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATG
RLSSSEPNLQNIPIRTEEGRRIRQAFIAPAGRKILAADYSQIELRIMAHLSQDAGLLKAF
AEGKDIHRATAAEVFGTDFDAVTTEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQTY
IDTYFARYPGVLRYMEETRAGAAELGYVSTLFGRRLYLPEIRDRNAMRRQGAERAAINAP
MQGTAADIIKKAMINIAQWIKTETQGEIAMIMQVHDELVFEVDADKAETLKQKVCELMAK
AAILDVALLAEAGIGDNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccattgcaaataacccacttgtccttgtggatggatcttcttatttataccgc
gcctattatgcgcctcctcacctgacaaactcaaagggcgaagcaacgggtgccgtctat
ggcgtagtaaatatgttacgcagtctattgagccgttaccaaccgagccatatcgccgtc
gtattcgatgctaaaggtaaaaccttccgtaatgatatgtacagcgaatacaaagcacag
cgcccaccgatgccggatgatcttcgttcacaaatcgaacctctgcataggattattcac
gcccttggtttaccccttatctctatccctggcgttgaagcggatgatgttatcggcaca
attgcccgccaagcaagccgtgagaatcgcgccgtactcattagtactggtgataaagat
atggcccaattggttgatgaaaatatcacgctgatcaataccatgacagataccatcatg
gggcccgatgaagttgcagcaaaatatggtgtaggtccagatcgtattattgatttctta
gccttgatgggcgataaggccgataatattcctggcttacctggtgtcggcgaaaaaacg
gcattagctatgctgactggcgcaggaagcgtggccaacctactcgccgctcccgaaaag
gtctctgacttaggcttcaggggcgcaaaaacgatggcggcaaaaatcactgaaaatgcc
gacatgcttagactctcctacgaacttgctaccattaaaaccgatgtggaacttgagcaa
gattggcatgagctcactgccaaacccgcagatagagacgaactgatcaaatgctacagc
gagatggagtttaagcgctggcttgccgaggtcttagataataaagcaccaacgaccgta
gtcgcggatgcggctaaagtcgaaacccaagaaagctctatgccaaatcctgcacttgaa
actcaatacgacacgattttaaccgaaactcagcttgatgaatggattgccaagctgaaa
caggcatcattaatagccgtggatacagagaccacgagtctcgactatatggtcgcggaa
ctggttggcatgtctttcgctgtggaagcaggcaaagccgcttacctgcctttagctcac
gattatgttggcgcgcctcaacagttagataagcaatttgcgctcgaaaaactacgcccc
attttagaagacgacaaggtcaaaaaagtcggccagaacctgaaatatgacatcagcgtt
ttggctaatgcgggcattaaattacagggtgtcgtatttgataccatgctcgaatcctat
gtttttaactccgtggcttcacgccatgatatggatggattagcgctcaagtatctaggc
cataaaaacattggctttgaagatattgcaggcaaaggggcgaaacaacttaccttcaat
caaatcccgttggaagttgcagccccgtatgctgcggaggatgcggatattactctgcgt
ttacaccagcacctatggccaaggctagaaaaagaacctcaattggcctcagtatttact
gaaattgaattacccttaatccaagtactatcagacattgagcgccaaggtgtattaatt
gatagcatgttactcggccaacagagtgatgagctagcgcgtaaaatcgataccttagaa
gaaaaagcctacgagattgcaggtgaaaaatttaatctcggttcacccaaacaactgcaa
gtgctattttttgaaaaactaggttatccaatcaccaaaaaaacaccaaagggcgcgcca
tcgaccgcggaagaagtattagtcgaattagccttagatttcccactgccaaaggtgatc
ctcgagcatcgcagcctatctaagttaaaaagtacttacacagataaactaccgctgatg
gtcaatgccaagactgggcgcgttcacacaagttaccaccaagctaatgcggcaacaggg
cgcttatcgtcaagcgagcctaacctgcagaatattcctattcgtaccgaagaaggtcgc
cgcattcgccaagcctttatcgcccctgcaggccgtaaaattttggccgctgattattca
caaatcgaactgcggatcatggcacatctatcccaagatgcgggtctgctcaaagccttc
gccgagggtaaagacattcacagagccaccgctgccgaagtatttggaactgactttgat
gctgtaacaacagaacagcgacgccgcgctaaagccgtaaacttcggccttatttatggt
atgtcagcctttggtttagctcgtcaactggatattcctcgtaacgaagctcaaacctat
attgatacttacttcgcccgctacccgggagtgttaaggtatatggaagaaacgcgcgca
ggagcagcagaattaggatatgtttcaacactatttggtcgtcgcctctacttgcccgaa
atccgggatcgtaatgcaatgcgccgccaaggcgcagaacgtgctgcgattaacgcaccg
atgcaaggcacggctgccgatatcatcaaaaaagccatgatcaatattgcccagtggatc
aagacagaaacccaaggcgaaatcgccatgattatgcaagtccacgacgaattagtattc
gaagtcgatgccgataaagcagagacgctcaaacaaaaagtatgtgaactcatggcgaag
gctgcaatcctcgatgtagcattactcgcagaagctggcattggtgataattgggatgaa
gcccactaa
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