Shewanella sp. W3-18-1: Sputw3181_0896
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Entry
Sputw3181_0896 CDS
T00453
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sputw3181_0896
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shw01007
]
Sputw3181_0896
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shw03016
]
Sputw3181_0896
Enzymes [BR:
shw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Sputw3181_0896
Amino acid related enzymes [BR:
shw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Sputw3181_0896
Transfer RNA biogenesis [BR:
shw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sputw3181_0896
Prokaryotic type
Other AARSs
Sputw3181_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABM23746
UniProt:
A1RGF1
LinkDB
All DBs
Position
1021858..1023360
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AA seq
500 aa
AA seq
DB search
MTEQVQDENKLIAERRAKLDSIRPNCSANAHPNTFRRTHKAAELQEKYGQNTKEELEALG
FRTSIAGRIMAKRGPFLVIQDVSGRIQAYAEKGVQADLKDRYQGLDIGDIIGVTGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVV
AAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKF
WTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVAN
GFSELNDAEDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagatgaaaacaaactgatcgccgagcgtcgtgccaagctagac
agcattcgcccaaattgtagcgctaatgctcaccctaataccttccgtcgcacccataaa
gcggctgagttacaggagaaatacggccaaaacactaaggaagaactcgaagccttaggt
tttagaaccagcattgctggtcgtatcatggcaaaacgtggcccattcctcgtaattcaa
gacgtgtctggtcgtatccaagcttatgctgaaaagggcgttcaagcggatctgaaggat
cgttaccaaggtctggatatcggtgacatcatcggcgtaactggtcagttacacttgtct
ggtaaaggcgatctgtacgtcaatatggaagagtaccaactgctgaccaaagcactgcgt
ccactgccagagaaattccacggcttaaccgaccaagaaacccgttaccgccaacgttat
gttgacttaatcgttaacgaagaatctcgtcaagccttcgtgatgcgctcaaaagtggtt
gcagctatccgtaacttcatgatcaaaaaagagttcatggaagttgaaaccccaatgatg
cacgtgatccctggcggcgcttcagcccgtccatttatcacgcaccacaatgcgctggac
atgccaatgtacctgcgtatcgcgccagagctatacctcaagcgtttagtggtcggtggt
tttgagcgtgtgttcgaaatcaaccgtaacttccgtaacgaaggtctgtcgccacgccat
aacccagaattcactatgatggaattctatatggcttacgctgattacaaagatttgatg
gacttaaccgaagaactgttaagctcaatcgcgatcgaattgttaggcagtgcgcaaatg
ccatacggcgagcacaccgttgatttcggcggcccatatgcccgtctgagcatgttagaa
gcgattcagaagtacaatcctgataacgcgactatccaagccatgacctacgagcaagtg
aaagatctcgaatttatgcgtgaattggctatcagcctaggtatcaagatcgagaagttc
tggacctgtggtcagctattagaagaaatcttcggtgaaactgctgaatggcaattaatg
caaccgaccttcatcactggctacccagcggacatttcgccactggcacgtcgtaacgat
gacaatcacttcatcaccgaccgttttgaattcttcatcggtggtcgtgaagtagctaac
ggtttcagcgagttaaatgatgctgaagatcaagacagccgctttaaagcgcaggttgat
gccaaagacgcgggtgacgatgaagccatgttctacgatgcggactatatcactgcactg
gaacacggtttaccaccaacagcgggtcaaggtattggtatcgaccgtttagtgatgcta
ttcactaacactcatacaatccgtgatgtgatcctattccctgcaatgcgcccacaagcc
taa
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