Shewanella sp. W3-18-1: Sputw3181_1298
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Entry
Sputw3181_1298 CDS
T00453
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_1298
Enzymes [BR:
shw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sputw3181_1298
DNA repair and recombination proteins [BR:
shw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sputw3181_1298
Prokaryotic type
Sputw3181_1298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABM24141
UniProt:
A0A6N3J301
LinkDB
All DBs
Position
1482351..1483832
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AA seq
493 aa
AA seq
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MISLKEQMATSNVGDTLMWFRQDLRLADNQALTAACDWARAQGTALRAIYIATPIQWACH
DVAPIQLDFIERHINLLAKGLGCLGIQFELIQLERFADIPQFMLDYCQQHNITRVFAGSE
PEINERVRDQACIDAGVPLLLTDEHCLLAPGTVLNLSGEMYRVFTPFSRKWREIAARHAI
LPLGVPAPLGPVLPEPKALNLAVNKVSSEQWGAGEGQAKRLLCDFVQQKVQDYKQDRDFP
ALDGTSCISPYLAIGVLSARQCVAALLQRFPEVIVDDTSLGRTWLNELVWREFYRHLLVA
FPDLSKNYNFNRQADQVQWRNNIEEFKAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVV
ASFLTKHLLIDWRWGERYFRQKLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEK
FDPDGSFIRKYLPELASWGIKQLHQPNTAKTPLLFKQPLFAEQAAYPSAIVDHTEARVRA
LSVLGVLKKASAL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgatatcacttaaagaacaaatggctacgtcaaatgtaggcgatacactgatgtggttt
cgtcaagatttaagacttgccgataatcaagcattaacagcggcttgcgattgggcaagg
gcgcaaggtactgcgcttagggctatatatattgcaactcccatccagtgggcatgccat
gatgtagcgcctattcaattagattttattgaacgtcatattaatctgcttgcgaaaggt
cttggatgtttaggtattcagtttgagttaattcaattagagcgttttgcggatatccca
caatttatgcttgattattgtcagcagcacaatattacaagggtgtttgctggctcagag
ccagagataaacgaacgagttcgcgatcaggcatgcattgatgcgggtgtgccgctgttg
ttaactgatgaacattgtttgctcgcgccaggcacagtgttgaacttatcgggtgaaatg
tatcgagtttttaccccttttagtcgaaagtggcgagaaattgccgcccgtcatgccatt
ttgccactcggagttcccgcaccacttgggcccgttttaccagaacctaaagcgttaaat
ttagccgtgaataaagtatcgagcgaacaatggggcgcgggagaagggcaagctaagcgt
ttgctgtgcgattttgtacagcaaaaagtgcaagattataaacaggatcgtgattttccg
gccctagatgggacgagttgtatttctccttatttggcgattggcgtgctcagtgcacgc
caatgtgttgccgcattattacagcgttttcctgaggtgatcgtggatgatacaagcctt
ggccgaacttggcttaatgagcttgtctggcgtgagttttatcgtcatttattagtcgca
tttccagacttatctaaaaattataattttaatcgtcaagcagaccaagttcagtggcgt
aataatattgaagagtttaaggcttggtgcgagggacgaactggttatcctattgttgat
gcagctatgcgtcagcttaatcaaacaggttggatgcacaatcgcctgcgtatggtggtc
gccagtttcttaaccaaacatttgttaattgattggcgttggggtgagcgctatttccgc
caaaaactcattgatggtgacttagcggctaataatggtggctggcaatggtctgctgga
tgtggatgtgatgcccaaccttatttccgtatttttaatccaatgagccagagtgaaaag
tttgatccagatggcagctttatccgtaaatacttaccagagctggcatcttggggaata
aagcaactgcatcaacccaataccgctaagactcctttattgtttaaacagccattattt
gccgaacaagccgcttatccgagtgccatagtggatcacaccgaagcaagggttagagca
ttaagtgtgctcggcgtattgaaaaaggcttctgccttataa
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