Shewanella sp. W3-18-1: Sputw3181_2069
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Entry
Sputw3181_2069 CDS
T00453
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sputw3181_2069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_2069
Enzymes [BR:
shw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sputw3181_2069
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sputw3181_2069
RecFOR pathway proteins
Sputw3181_2069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
AAA_22
AAA_14
nSTAND3
Bac_DnaA
Mg_chelatase
AAA_18
RNA_helicase
NB-ARC
Rad17
AAA_17
AAA_24
NTPase_1
DUF815
TsaE
AAA_25
AAA_19
DEAD
AAA_11
NACHT
ATPase_2
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ABM24897
UniProt:
A1RJQ2
LinkDB
All DBs
Position
complement(2379176..2380180)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIQPQLQVQDDVVDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLI
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
LEFYNIKDLSTIVTRSAQVMGLEIDTEGAFEIARRSRGTPRIANRLLRRVRDYAEVKHDG
AITQFVADHALDLLDVDNEGFDYMDRKLMLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRIATARAYQHFQLIKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatagactcatccagccgcaacttcaagtacaagatgatgttgtggat
agggcaatgcggcctaaattacttgatgaatatacagggcaagatgacactcgcgctcag
cttaaggtttttattcaagcagccaaaaatcgtaatgaagccttagatcatatgttgatt
tatggtcctccagggctaggtaaaacgacattagcgatgattgttgcgaatgaaatgggc
gttaatatcaaatccacctcaggtcctgtgcttgaaaaagcaggggatttggccgcatta
ctcacgaatttagaatccggtgatgtgctatttatcgatgaaattcatcgtttaagccca
gtagtggaagagatattgtatccagcaatggaagactaccaactggatatcatgataggt
gaggggcctgcagcgcgttccatcaagcttgatttaccgccatttactttagtaggtgca
accactcgagcaggggcattaacatctcctttgcgtgctcgttttggtatcccacttcga
cttgaattttataacattaaagatttaagcacgattgtaacgcgctctgcacaagtgatg
ggattagagatcgatacagaaggtgcgtttgagattgcacgacgttctcgtggtacacca
aggatagctaatcgcttacttcgccgtgtgcgcgactatgccgaggttaaacatgatggt
gcgatcactcaatttgttgccgatcatgcgctggatctactcgatgtcgataatgaaggg
ttcgactatatggatcgaaagttgatgttagccattatcgataagtttatgggtgggcct
gttggcttagataacttagccgctgcaataggtgaagaacgcgaaactatcgaagatgtg
ctagagccttttttgatccaacaagggtttatccaaagaactcccagaggacgcattgct
acggcacgtgcgtatcagcattttcagttgatcaaacctgagtaa
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