Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4248
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Entry
SHJG_4248 CDS
T02063
Name
(GenBank) D-ribose ABC transporter permease protein
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHJG_4248
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SHJG_4248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shy02000
]
SHJG_4248
Transporters [BR:
shy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SHJG_4248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
PucR
Motif
Other DBs
NCBI-ProteinID:
AEY89520
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Position
4890702..4892651
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AA seq
649 aa
AA seq
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MATDTLKRPAGASGAPGGLRRLLLDNGALTALIVLVIALSALSGDFLTTDNLLNIGVQAA
VTAILAFGVTFVIVSAGIDLSVGSVAALSATVLAWSATSHGVPVVLAVLMAVATGIVAGL
VNGFLIAYGKLPPFIATLAMLSVGRGLALVISQGSPIAFPDSVSHLGDTLGGWLPVPVLV
MVVMGLIAAFVLGRTYIGRSMYAIGGNEEAARLSGLRVKRQKLAIYALSGLFAAAAGIVL
ASRLSSAQPQAADGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVS
AFWQQVVIGVVIALAVLLDTVRRKAGATPVAAGTGGPKGKQAATYALAAVVTVAIVGATS
FLHSGSSSSTTPKMGLSLSTLNNPFFVQIRSGAQAEAKKLGVDLTVTDAQNDASQQANQL
QNFTSSGLGAIIVNPVDSDAASNSVKAADKAKIPVIAVDRGVNHASVDTLVASDNVAGGE
LAAKTIAEKLGGKGKIVILQGQAGTSAARERAAGFAQGLKAYPGIQVLAQQPADFDRTKG
LDVMSNLLQAHPDVQGVIAANDEMALGAIKALGSKAGKSVQVVGFDGTPDGLTAVKNGTL
YASVAQQPSQLGKIAVDNALKAVKGDKVDPTVKVPVKVVTKDNVAGFTG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtggccactgacacgctcaagaggccggcgggcgcgagtggcgccccgggcggcctgcgc
cggctgctcctcgacaacggcgcgctcaccgcgctgatcgtcctggtcatcgccctgtcg
gcgctgtccggcgacttcctgacgacggacaacctgctcaacatcggcgtccaggcggcc
gtgacggcgatcctcgccttcggtgtgaccttcgtgatcgtctcggcgggcatcgacctg
tcggtcggctcggtggccgcgttgtcggcgaccgtgctggcctggagcgccacctcccac
ggggtgccggtcgtgctcgcggtgctgatggcggtcgccaccggcatcgtcgccggcctg
gtgaacggtttcctcatcgcctacggcaagctgccgccgttcatcgcgacgctggccatg
ctgtcggtgggccgcggtctcgccctggtgatctcgcagggctcccccatcgccttcccg
gactcggtctcccacctcggcgacaccctcggcggctggctgccggtgccggtgctggtc
atggtggtgatgggtctcatcgccgcgttcgtgctgggacggacgtacatcggccggtcc
atgtacgcgatcggcggcaacgaggaggccgcgcggctgtccggtctccgggtgaagcgg
cagaagctcgcgatctacgccctgtccggactgttcgccgccgcggcgggcatcgtgctc
gcctcccggctgtcctcggcgcagccgcaggccgccgacggctatgagctggacgccatc
gcggcggtcgtcatcggcggcgcctcgctggcgggcggcaccggcaaggcgtccggcacg
ctgatcggcgcgctgatcctggcggtgctccgcaacggcctcaacctgctctcggtctcc
gcgttctggcagcaggtcgtgatcggtgtcgtgatcgcgctggcggtgctgctggacacc
gtgcgccgcaaggccggggcgaccccggtggccgccggcacgggcgggccgaagggcaag
caggcggccacgtacgcgctcgccgccgtggtcaccgtcgccatcgtcggcgcgacctcc
ttcctgcacagcggttcctcctcgtccacgaccccgaagatggggctgtccctgtccacg
ctcaacaaccccttcttcgtgcagatccggtcgggcgcccaggccgaggcgaagaagctg
ggtgtggacctgaccgtcaccgacgcgcagaacgacgcctcgcagcaggccaaccaactc
cagaacttcaccagttcgggcctgggcgcgatcatcgtcaacccggtggactcggacgcg
gcgagcaactccgtgaaggccgccgacaaggcgaagatcccggtcatcgcggtggaccgc
ggtgtcaaccacgcgtccgtggacaccctggtggcctccgacaacgtcgccggtggtgag
ctggccgcgaagaccatcgccgagaagctgggcggcaagggcaagatcgtcatcctccag
ggccaggcgggcacgtcggcggcccgggagcgggcggccgggttcgcccagggcctcaag
gcctacccgggcatccaggtgctggcgcagcagcccgccgacttcgaccgcaccaagggc
ctcgacgtgatgtcgaacctgctccaggcccacccggacgtgcagggcgtcatcgccgcc
aacgacgagatggccctgggcgcgatcaaggcgctcggctccaaggccggcaagtccgtg
caggtggtcggcttcgacggcaccccggacggcctgaccgcggtcaagaacggcacgctg
tacgcgtccgtcgcccagcagccctcgcagctggggaagatcgccgtggacaacgccctc
aaggcggtcaagggcgacaaggtggacccgacggtgaaggtgccggtgaaggtggtcacg
aaggacaacgtggccggcttcaccggctga
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