Sphingobium xenophagum: CJD35_00675
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Entry
CJD35_00675 CDS
T05146
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shyd03009
]
CJD35_00675
Enzymes [BR:
shyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CJD35_00675
Ribosome biogenesis [BR:
shyd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CJD35_00675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASY43133
UniProt:
A0A249MP46
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All DBs
Position
I:129996..130952
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AA seq
318 aa
AA seq
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MGSGVSIIEATIAQAQDGMRLDRALADLLPDLSRERLKALINDGHVRSTGQPIKIGTTIK
VATGQSFAITLPAPVALETQAQDIPLHIVHEDADLIVVDKPAGLVVHPAAGNLDGTLVNA
LLHHCQGQLSGIGGVARPGIVHRIDKDTSGLLVVAKSDKAHDGLARQFKDHSIQRLYAAI
VYGHPLPGTGTVDAWLGRSDADRKKMAVHREGRGKHAVTHYRTVERLRDAAMVECRLETG
RTHQVRVHMHHIGHPLIGDPVYGRERKGFKSILETLGFKRQALHAKSLGFIHPVTDERLM
FQSALPADMQELLSLLHV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgggggtttccatcatcgaagcgacaatcgcgcaggcgcaggacgggatgcgg
ctcgaccgggcgctggccgacctgctgcccgacctgtcgcgcgaacggttgaaggcgctg
atcaacgacggccatgtccgctcgaccggccagccgatcaagatcggcaccaccatcaag
gtcgcgaccggccagtctttcgccatcaccctgcccgcgcccgtagcgctggaaacgcag
gcgcaggatattccgctccacatcgtgcatgaggatgcggacctgatcgtcgtggacaag
cccgccgggctggtcgtccatcccgccgcgggcaatctggacggcacgctggtcaatgcg
ctgctgcatcattgccagggtcagttgtcgggcattggcggcgtcgcccggcccggcatc
gtccaccgcatcgacaaggatacgtccggcctgctggtcgtcgccaaatcggacaaggcg
catgacgggctggcgcgccagttcaaggatcacagcatccagcgactctatgccgcgatc
gtctatggccatcccctgcccggcaccggcacggtcgatgcctggctcggtcgttcggac
gctgatcgaaagaagatggcggttcatcgcgaagggcgcggcaaacatgccgtcacccat
tatcgcacggtggaacggctacgcgacgcggccatggtggaatgtcggctggaaaccggc
cgcacccatcaggtccgcgtccatatgcaccatatcggacaccccttgatcggtgatccg
gtttacggtagagaaagaaaaggtttcaaatcaatactggaaacgctgggtttcaaaagg
caggcattgcacgcaaaaagcctggggttcatacatccggtaacggacgaacggcttatg
ttccaaagtgcactccctgccgatatgcaggaactgttaagcctgctccacgtatag
DBGET
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