Shinella sp. HZN7: shn_05045
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Entry
shn_05045 CDS
T04278
Name
(GenBank) ATP-dependent DNA ligase
Organism
shz
Shinella sp. HZN7
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
ANH03459
UniProt:
A0A1A9FZI7
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Position
1052095..1053720
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AA seq
541 aa
AA seq
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MRAFATLLDRLVLTPSRNGKLKLLADYFRDTPDPDRGYGLAAIAGTLDLKSVKPALLREL
VLERMDEVLFRYSYDYVGDLAETIALVWDEERKERVPDEAQPRLGAVVSRMNALGRTEVR
GAVRDLLDRLDPSARFAFLKLATGGLRIGVSARLAKQALADFSGRDVTEIETLWHGLSPP
YEPLFAWLEGRADRPVLATPAIFHSVMLANPVGEGDLDALDPADFVAEWKWDGIRVQLSA
AGSTRRLYSRSGDDISAAFPDVLEAISFEGVVDGELLVGGTARMNSPTRTFSDLQQRLNR
KTVTPRMLEDYPAFVRAYDVLFEGEADVRPQSFSDRRARLGEMIEKAPHDRFDLSPLVPF
GSWAELETIRRDPPDPVIEGVMIKRLDSPYQAGRMKGPWFKWKRDPFNIDAVMMYAQRGH
GKRSSYYSDFTFGVWTDGPDGPLLVPVGKAYFGFTDAELEVLDRYVRNNTTDRFGPVRAV
RAEPGYGFVLEVAFEGINRSTRHKSGVAMRFPRIARLRQDKLPADADRLETLMAMVEAKE
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagagccttcgccacgctgctcgaccgcctcgtcctcaccccctcgcgcaacggcaag
ctaaagctgctcgccgattatttccgcgacacgcccgatcccgaccgcggctacggcctt
gccgccattgccggcacgctggacctcaagagcgtcaagccggcgctgctgcgcgagctc
gtgctggagcgcatggacgaggtgctgttccgctattcctacgattatgtcggcgatctc
gcggaaaccatcgcgctcgtctgggacgaggagcgcaaggagcgcgtgccggatgaagcg
cagccccggctcggcgccgtcgtttcccgcatgaacgcgctcggccgcacggaggtgcgc
ggcgcggtgcgcgatctcctcgaccggctcgatccctccgcccgcttcgccttcctcaag
cttgcgaccggcggcctgcgcatcggcgtttccgcgcgccttgccaagcaggcgctcgcc
gatttctccggcagggacgtcaccgagatcgagacgctgtggcacgggctgtcgccgccc
tacgaaccgctcttcgcctggctggagggtcgggcggaccgcccggtgctcgccaccccc
gccatcttccattccgtcatgctcgccaatccggtgggggagggggatctcgacgcgctc
gacccggccgatttcgtcgccgaatggaagtgggacggcattcgcgtgcaactgtcggcg
gccggcagcacgcgccgcctctattcccgctccggcgacgacatctccgccgccttcccg
gatgtgctggaggcgatcagcttcgagggggtggtggacggcgagctgctcgtcggcggc
acggcgcgcatgaacagcccgacgcgcaccttctccgatctccagcagcgcctcaaccgc
aagaccgtcaccccgcgcatgctggaggactatcccgccttcgtgcgcgcctatgacgtg
ctcttcgagggcgaggcggatgtgcgcccgcagagcttttccgatcgccgcgcccgcctc
ggcgaaatgatcgagaaggcgccgcacgatcgtttcgacctgtcgccgctggtgcccttc
ggctcctgggccgagctggagacgatccgccgcgatccgcccgatccggtcatcgagggg
gtgatgatcaagcggctggacagcccctaccaggccggccgcatgaagggcccgtggttc
aagtggaagcgcgatcccttcaacatcgacgccgtcatgatgtatgcccagcgcggccac
ggcaagcgctcgagctactattccgacttcaccttcggcgtgtggaccgacggcccggac
ggtcccctgctggtgcccgtcggaaaggcctatttcggcttcaccgatgccgagctcgaa
gtgctcgaccgctacgtgcgcaacaacacgaccgaccgttttggccccgtgcgcgccgtc
agggccgagcccggctacggcttcgtgctggaggtcgccttcgagggcatcaaccgctcc
acccgccacaaatccggcgtcgccatgcgcttcccccgcatcgcccgcctgaggcaggac
aagctgcccgccgacgccgaccggctggagacgctgatggcgatggtggaggcgaaggaa
gggtag
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