Shinella sp. HZN7: shn_27360
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Entry
shn_27360 CDS
T04278
Name
(GenBank) D-ribose ABC transporter substrate-binding protein
KO
K17202
erythritol transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_27360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_27360
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Erythritol transporter
shn_27360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Arginase
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
ANH07873
UniProt:
A0A1A9GC18
LinkDB
All DBs
Position
pShin-03:26612..27553
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AA seq
313 aa
AA seq
DB search
MNITRRLITVGFAAVMAAGVAMPSFAADLIAIITPSHDNPFFKAEAVGAEAKAKELGYET
LVLVHDDDANKQSQLIDTAIGRGAKAIILDNAGSEASIAAVQKAKDAGVPSFLIDREINA
TGVAVSQIVSNNYQGAQLGAEEFVRLMGEKGNYVELLGREADLNAGIRSKGYHDVIDEYP
DMKMVAQQSANWSQTEGYSKMETILQANPDIQGVIAGNDTMAMGAIAALQAAGRKDVIVV
GFDGSNDVRDSIKADGIKATVMQPAYAQAQLAVTQAHEYITTGKVPAEEKQLMDCVLITA
DNAGKLETFALAE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacattacccgcagactgatcaccgtcggcttcgccgccgtcatggccgcaggcgtc
gccatgccgtccttcgctgccgatctcatcgccatcatcacgccgagccacgacaatccg
ttcttcaaggcggaagccgtcggcgcggaggcgaaggccaaggaactcggctacgagacg
ctggtcctcgtgcatgacgacgacgccaacaagcagtcgcagctcatcgatacggccatc
ggccgcggcgccaaggcgatcatcctcgacaatgccggctcggaggcctcgatcgccgcc
gtgcagaaggcgaaggatgccggcgttccctccttcctgatcgaccgcgagatcaacgcc
acgggcgtcgccgtctcgcagatcgtctcgaacaactaccagggcgcgcagctcggcgcg
gaagaattcgtcaggctgatgggcgagaagggcaactatgtcgagctgctcggccgcgaa
gccgatctcaatgccggcatccgctccaagggctatcacgacgtcatcgacgaatatccc
gacatgaagatggtcgcccagcagtcggccaactggagccagaccgaaggctactccaag
atggagaccatcctccaggcgaacccggacatccagggcgtgatcgccggcaacgacacc
atggccatgggcgcgatcgcggcactccaggcggccggccgcaaggatgtcatcgtcgtc
ggcttcgacggctcgaacgatgtgcgcgactcgatcaaggccgatggcatcaaggcgacc
gtcatgcagccggcctatgcccaggcccagctcgccgtcacccaggcgcatgaatacatc
acgaccggcaaggtgccggccgaggaaaagcaactgatggactgcgtgctcatcaccgcg
gacaacgccggcaagctcgagaccttcgcactcgccgaataa
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