Shinella sp. HZN7: shn_34345
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Entry
shn_34345 CDS
T04278
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_34345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_34345
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
shn_34345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
AAA_29
NACHT
nSTAND1
DUF87
Sigma54_activat
AAA_33
RsgA_GTPase
MobB
PRK
MMR_HSR1
nSTAND3
ATP-synt_ab
TsaE
NB-ARC
MeaB
APS_kinase
AAA_23
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ANH09196
UniProt:
A0A1A9GDR2
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Position
pShin-11:complement(69953..71632)
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AA seq
559 aa
AA seq
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MSAPVLSVRDLTVTLNLPGAGPRVLLDKVSLELGKGEVLGLVGESGSGKSLFCRTLVRLL
PSRNMRITDGRILLGDEDLARASEAQMLDVRGGRIGMIFQNPTSHLDPVMTIGDQLTEGI
RFHQGLDARAARKAAVAILHQIGFLEPERQFDAYPHEFSGGMRQRAMIGVALSCNPEILI
ADEPTTALDVTIQAQILQLLMDIRRERDLSIILITHDLGIVAQTCDRIAVMREGRLVEQG
RKRDLLRAPVHPYTKALIGSHPSMPSPSAGQGAAAPKAIGTPADKPLLEVDDVNVRFPGT
GSLFGGRSGAVHAVAGVSLRILPGETVGIVGESGSGKSTLARAILGLTPIASGNVVFDGT
SLREDRVAFLGRLRRETAMVFQDPYNALNPRLSIGDMLTEVLKVQGRTPAADIPARVGEL
LDLVDLGREFAARRPRSMSGGQCQRAGIARALAVNPRLIIADESTAALDVTIQAQILDLF
RVLKRKMNLTLLFIAHDLAIVRSLCDRVVVMHRGHIVEQGASAQVFEHPAQPYTQALIRA
IPDIDPDKPLLPQAAREVA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccccgttctcagcgtcagggacctcacggtcaccttgaacttgccgggcgcc
gggccgcgcgtgctgctcgacaaggtttcgctcgagctcggcaagggcgaggtgctcggg
ctggtcggcgaaagcggttcgggaaagagcctgttctgccgcacgctggtccgcctcctg
ccgtcccggaacatgcggatcacggacggccgcatcctgctaggagatgaggatctggcc
agggcgagcgaggcgcagatgctggacgttcgcggcgggaggatcgggatgatcttccag
aatccgaccagccatctggatccggtgatgacgatcggcgaccagctgaccgaagggatc
cggtttcatcaggggctggatgcccgtgccgcgcgcaaggcggcggtcgcgatcctgcac
cagatcggctttctcgagccggagcggcagttcgacgcctatccgcacgaattttccggc
ggcatgcgccagcgcgcgatgatcggcgtcgcgctgtcgtgcaatccggagatcctgatc
gccgacgagccgacgaccgcactcgacgtcaccatccaggcgcagatcctgcaattgctg
atggacatacgccgtgagcgcgacctgtcgatcatcctgatcacccatgatctcggcatc
gtggcacagacctgcgaccgcatcgcggtcatgcgcgaaggccggctcgtcgagcagggc
aggaagcgcgacctgctgcgcgcgcccgtccatccctatacgaaggcgctcatcggcagc
catccatcgatgccgtctccttcggcggggcaaggggcggcggcccccaaggctatcggg
acgccggcggacaagcctctcctggaggtggacgatgtcaatgtccgctttcccggcacg
ggcagcctgttcggcggacggtccggcgcggtccatgcggtcgcgggggtttcgctccgg
atcctgccgggcgagacggtcggcatcgtcggtgaatcgggcagcggcaagagcaccctg
gcgcgggcgatcctggggctgacgccgatcgcttcgggcaatgtcgtcttcgacggaacg
agcctgcgcgaggatcgcgtcgcgtttctgggtcggctacgccgcgagacggcgatggtc
ttccaggatccgtacaatgccttgaaccctcgtctttccatcggcgatatgctgaccgag
gtgctgaaggttcagggccgcacgccggctgccgatattccggcgcgggtcggcgaattg
ctcgatctcgtcgatctcggccgcgaattcgccgcgcggcgaccgcgcagcatgagcggc
ggccagtgccagcgggccgggatcgcccgggcgcttgcggtgaacccgcgcctgatcatc
gccgatgagagcacggcggccctcgacgtcaccatccaggcgcagatcctcgatctgttc
cgcgtgctgaagcgcaagatgaatctgaccttgctgttcatcgcccacgaccttgccatc
gtgcgcagcctctgcgaccgggtcgtcgtcatgcatcgcgggcatatcgtcgagcaggga
gcctcggcgcaggtgttcgagcatcccgcgcagccctatacgcaggcgctgatccgcgcc
attcccgatatcgacccggacaagccgcttctgccgcaggcggcacgggaggttgcatag
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