Streptococcus intermedius JTH08: SCIM_1163
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Entry
SCIM_1163 CDS
T02156
Symbol
ddlA
Name
(GenBank) D-Ala-D-Ala ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00470
D-Amino acid metabolism
sie00550
Peptidoglycan biosynthesis
sie01100
Metabolic pathways
sie01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCIM_1163 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCIM_1163 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCIM_1163 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sie01011
]
SCIM_1163 (ddlA)
Enzymes [BR:
sie01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SCIM_1163 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sie01011
]
Precursor biosynthesis
Amino acid ligase
SCIM_1163 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
BAM23817
LinkDB
All DBs
Position
complement(1334596..1335648)
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AA seq
350 aa
AA seq
DB search
MKMSKQQIILLYGGRSAERKVSVLSAESVMRAINYDKFFVKTYFITQAGDFIKTQEFSSK
PADDEKLMTNDTVIESQKMKPSDIYEEGAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGCN
ILSSSIAMDKITTKRVLASAGIPQVPYVAVVEGEDVEEKIAEVEVNLTYPVFTKPSNMGS
SVGISKSENKDELCSALKLAFKYDSRVLIEQGVNAREIEVGLFGNEGAKSSLPGEVVKDV
AFYDYEAKYIDNKITMDIPAKLSEDVIATMCDYAEKAFHAIGGVGLSRCDFFYTNKGEIF
LNELNTMPGFTQWSMYPLLWENMGLSYSDLIEQLVLLAQEIFAKREKHLL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcaaaacaacaaatcattcttctttacggcggacgcagtgcggaaagaaaa
gtctctgtcttatcagcagagagtgtcatgcgtgcgattaattatgacaaattttttgtc
aaaacttatttcatcacgcaagcgggtgattttatcaagacgcaagaattttcaagcaaa
cctgctgatgatgaaaaattaatgaccaatgataccgtcattgagagtcaaaaaatgaag
ccgagtgacatttacgaagaaggggcagttgtgttcccagttcttcatggcccaatggga
gaagacgggtctatccaaggatttcttgaagtgttgaaaatgccttatgttggctgcaat
attctttcgtcgagtattgcgatggataaaatcacaactaaacgtgtgttagcttctgct
ggtattcctcaagtaccgtatgtagccgtagtggaaggggaagatgtagaagaaaagatt
gcagaagtagaagttaatctgacttatccagtctttactaaaccatcaaatatgggttct
agtgttggcatttctaaatctgaaaacaaagatgaattgtgttctgctcttaagttagct
tttaaatacgatagtcgtgtcttgattgagcaaggtgtcaatgcgcgtgaaattgaagtt
ggtttatttgggaacgaaggagctaaaagtagtttaccaggtgaagtggtgaaagatgtc
gctttttatgattacgaagccaagtacattgacaataaaattactatggatatccctgca
aaactctctgaagatgttattgccactatgtgtgactatgctgaaaaagctttccatgca
attggtggcgttgggttatctcgttgtgatttcttttatactaataagggtgagattttc
ctcaatgagttaaacacgatgcctggattcacacagtggtcaatgtatccacttctttgg
gaaaatatgggactttcttactctgacttgatcgagcaattagtcctcttagcccaagaa
atctttgcaaaacgtgaaaaacacttactgtga
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