Streptococcus infantarius subsp. infantarius: Sinf_1020
Help
Entry
Sinf_1020 CDS
T01765
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sif
Streptococcus infantarius subsp. infantarius
Pathway
sif03420
Nucleotide excision repair
sif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sinf_1020 (pcrA)
03430 Mismatch repair
Sinf_1020 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_1020 (pcrA)
Enzymes [BR:
sif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sinf_1020 (pcrA)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sinf_1020 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Sinf_1020 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
AEZ62349
LinkDB
All DBs
Position
complement(1044460..1046787)
Genome browser
AA seq
775 aa
AA seq
DB search
MVFYTMNPLLNGMNDKQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLINEKFVNPWNI
LAITFTNKAAREMRERAMALNPATADTLIATFHSMCVRILRRDADHIGYNRNFTIVDPGE
QRTLMKRILKNLNLDPKKWNERAILGTISNAKNDLLDEVAYENQAGDMYTQIVAKCYKAY
QAELRQSEAMDFDDLIMLTLRLFDQNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLA
SRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVMLEENYRSTKKILQAANAVI
NNNRNRRPKKLWTQNTDGEQIVYYRARDEREEAVFVASTIDNIVREQGKNFKDFAVLYRT
NAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNVIANTADNISYERIVNEPKR
GVGPGTLEKIRDFANLQNMSLLDASANIMLSGVKGKAAQAVWDLANLLMNLRTDLDKYSV
TELVETVLDKTGYLDALRVQNTLESQARIENIKEFLTVTKNFDENQDDAPEDESGIDKLS
RFLNDLALIADTDDGNAETAEVTLMTLHAAKGLEFPIVFLIGMEEGVFPLSRAAEDQDEL
EEERRLAYVGITRAEQLLFVTNANTRTLFGKTSYNRPSRFIREIDDELLQYQGLARPANS
SFGIRYSNSSDQSMSFGKGMSLQQALQARKAKVQPTSHGAQPYSKAVKGVPFGQSASTSK
EAVDWQIGDIAHHRKWGDGTVLAVTGSGKTQELKINFPEVGLKKLLASVAPIEKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtggtcttttatacgatgaatcctttattaaatggtatgaatgataagcaggctgaagct
gttaaaacgacagaaggtccgcttttgattatggcaggtgcgggctctgggaagactcgc
gtgttgacacaccgcattgcctatttgattaatgaaaaatttgtaaatccgtggaatatc
ttagcgattaccttcaccaataaagctgcgcgtgaaatgcgtgaacgtgctatggccttg
aatccagcaacggctgatacgttgattgctaccttccacagcatgtgtgtgcgcattttg
cgtcgtgatgctgaccatattggttacaatcgcaatttcactatcgtggatccaggtgag
caacgtacgctcatgaaacgtattttaaagaacctcaaccttgatcctaaaaaatggaat
gaacgtgccatccttggaaccatttcaaatgccaagaatgatttgcttgatgaggttgca
tatgagaatcaagctggtgatatgtacacgcaaattgttgctaaatgttataaggcttat
caagcggaacttcgtcaaagcgaagctatggactttgatgaccttatcatgttgacgctt
cgtttgtttgaccaaaatccagatgttttggcttattaccaacaacgctaccaatatatt
cacgtagatgagtatcaagatactaaccatgctcagtatcagttggttaaactcttggca
tctcgttttaaaaatatctgtgtcgtcggtgatgctgatcaatctatctatggttggcgt
ggtgctgatatgcaaaatatccttgattttgagaaagattatcctgaagccaaggttgtt
atgttggaagaaaactatcgttccactaagaaaatattgcaagcagctaatgccgttatc
aataataaccgcaatcgtcgtccgaaaaaactttggacacaaaatactgacggggaacaa
attgtttactaccgtgcgcgtgatgaacgtgaagaagcagtcttcgttgcttcaacgatt
gacaatattgtccgtgaacaagggaaaaactttaaagattttgcggttctttaccgtacc
aatgcgcaatcacgtactattgaagaagcgctgctcaaatcaaatattccttatactatg
gttggtggaacgaaattctacagccgtaaggaaattcgagacgtaatttcatacttgaat
gttattgccaatactgccgataacattagttatgaacgtatcgtcaacgaaccaaaacgc
ggtgtcggtcctggtacgcttgagaaaatccgtgactttgctaatcttcaaaatatgagt
ttgcttgatgcatcagctaacatcatgctttcaggtgtcaaaggaaaagcggcacaagcc
gtttgggatttggctaatcttcttatgaatcttcgtactgacttggacaaatacagtgtt
actgaactggtagaaactgttcttgataagacaggttatcttgatgcccttcgtgtgcaa
aatacacttgaaagccaagcacgtatcgaaaatatcaaagaattcttgactgttacgaaa
aattttgatgaaaatcaagacgatgccccagaagatgaatctggtattgacaaactaagt
cgtttcttgaatgatttggctttgattgcagatacagatgatggtaatgctgaaacagca
gaagtgactttgatgaccttgcacgctgccaaaggtttggaatttccaattgtcttcttg
attggtatggaagaaggggtcttcccactttcacgtgctgctgaagatcaagatgaatta
gaagaagaacgccgtttggcatatgttggtattacgcgtgctgagcaattgctctttgtg
acaaatgccaatacacgtaccttgtttggtaagacaagttataatcgtccatctcgcttc
atccgtgaaattgatgatgagttattgcaataccaaggtttggctcgacctgctaattct
tcatttggtattcgttatagcaatagcagcgatcaatcaatgagctttggtaaaggcatg
agcctccaacaagctcttcaagctcgcaaagcgaaagttcaaccgacttcacatggagcg
cagccatattcaaaagccgtcaaaggagtaccttttggccaatcagctagtacttcaaaa
gaagcagtcgactggcaaatcggagatatcgctcaccacagaaaatggggtgacggaact
gtccttgcagttacaggctcaggcaaaactcaagaactaaaaatcaatttcccagaagtt
ggacttaaaaaactactagccagcgttgcaccaattgagaagaaataa
DBGET
integrated database retrieval system
