Scardovia inopinata: SCIP_0128
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Entry
SCIP_0128 CDS
T03977
Name
(GenBank) ABC transporter ATP-binding component
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sij
Scardovia inopinata
Pathway
sij02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIP_0128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sij02000
]
SCIP_0128
Transporters [BR:
sij02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIP_0128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
Motif
Other DBs
NCBI-ProteinID:
BAR06195
LinkDB
All DBs
Position
complement(169635..171593)
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AA seq
652 aa
AA seq
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MAVSQYDPAQTALDEAEKADSAAGSDVQGHMLSQKQQAEYNDITQTEERLEEEEEHRYGS
DEGGSLKDFKVVFSSIRDYKKYSWATPLLVAGEVAMELLIPTLMAVLIDRGIQGKNMGEV
WKWGSLLIVVALISLTFGVGAGRTAAVASSGLAKNLRHDLFTKVQSFSFTNIDHFSTGSL
VTRLTTDVTNVQNAYQMLIRIAFRAPLMIIFAWIFAFRISHSISFIFLVVAPLLGFILIA
IGLTVHPIFVKVFHTYDRLNSDVEENLLGVRVVKSFTRENYEETKFKSVSQRIYNYFVKA
ELKLAWNMPVMQLAIYGTVLLLSWMAAHQIVASGNNEALGLTTGDLTSLFTYTLQILMAL
MMLSMIFIMVVISRASAGRIAAVLKEESTVTNPENPVPAVADGSISFNHVTFRYNKESEK
PVLSDINLTIPSGSTLGIVGGTGSSKSSLVQLIPRLYDSSEGNVQVGGVDVKGYSLDTLR
KEVAMVLQKNILFSGTIKENLKWGNPQASDEEVIHAAKLAQADEFIQGFPDKYDTYLEQG
GSNVSGGQKQRLCIARALLKKPKILILDDSTSAVDTKTDALIRKAFATEIPDTTIIIIAQ
RLSSVENADKIIMMEGGSIAAQGSHEELMRTSDEYRSIYKSQNQSGVIDDGE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagccagtatgatcctgcacaaacagcccttgatgaggctgaaaaagcagat
tcagcagccggcagcgacgttcaagggcacatgctctcacagaagcagcaagctgaatac
aacgacattacccaaactgaggaacggctggaagaggaagaggaacaccgttatggtagc
gacgaaggcggctcgctgaaagattttaaggtggttttcagcagtattcgggactacaaa
aagtacagttgggcaacccctctcctggtggcaggagaagtagccatggaactgctcatc
cctactctcatggccgttttgatagaccgtggcattcagggaaaaaatatgggcgaagta
tggaaatggggctccttactgatagttgtagccttgatttctctgacctttggagtcgga
gcaggccgtaccgcagccgtggcatcttcaggcctggcgaagaatttacgtcacgatctt
tttaccaaggtgcagagtttctccttcaccaacatcgaccatttctctaccggcagcctg
gtcaccagattgactaccgatgtgaccaatgttcagaacgcttaccaaatgttgatcagg
atagccttccgagctcctctgatgattatttttgcctggattttcgccttccgcatcagc
cacagcatctcctttatctttctggtagtcgctcctcttcttggctttatactgatagcc
attggactcactgtccaccccatatttgttaaggtttttcacacatatgacaggctgaac
agcgatgtggaagaaaatctgttgggggtcagggtagtgaagtccttcacccgcgaaaac
tatgaagagactaagtttaagagcgtttctcagcgtatctacaattattttgttaaagct
gagctgaaacttgcctggaacatgccggtcatgcagctagcgatttacgggaccgttctt
ctgctcagctggatggcagcccaccagattgtggcttcgggaaataatgaagcactaggt
ttaacaaccggagacctgaccagtttgtttacctatactcttcaaatcctgatggcgctg
atgatgctgtctatgatcttcatcatggtggtaatatctcgtgcttcagccggccgtatt
gctgctgttcttaaggaagaaagcactgttaccaaccctgagaatccggtacctgctgta
gcagatggttctatcagcttcaaccatgtcaccttccgctataacaaggaatcagaaaaa
cctgttctttccgatattaacctgaccattccttccgggtctacactgggaattgtggga
ggaacaggttcatccaagtcttccctggtccagcttatcccccgtttgtacgactcttcg
gaaggaaatgtacaggtaggcggagtagatgtcaaaggctattcgctcgataccctgagg
aaggaagtcgccatggtcctgcagaaaaatattcttttcagcggaaccattaaagaaaac
ctcaagtggggcaaccctcaagcaagcgatgaagaggtcatccacgcagccaaactggct
caagccgatgagtttattcaaggattccccgacaaatacgacacctatctggaacaggga
ggaagcaatgtttccggcggccagaagcaacgcctgtgcatagcccgggccctgctgaag
aagcctaagattctcattcttgatgattccacttcagctgtggacactaaaacagatgcc
ctgatccgcaaggcttttgctacagaaattcccgataccaccatcattatcattgctcag
cgcctgtcttccgttgaaaatgcagacaaaatcatcatgatggagggtggatccatagcc
gctcaggggtctcacgaagagcttatgcgcacatcagacgaataccgcagcatctacaaa
tctcaaaatcagtccggggtgattgatgatggagaataa
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