Ruegeria pomeroyi: SPO1954
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Entry
SPO1954 CDS
T00215
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPO1954
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SPO1954
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_IclR
HTH_5
YdaS_toxin
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
AAV95230
UniProt:
Q5LS16
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All DBs
Position
complement(2083155..2084066)
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AA seq
303 aa
AA seq
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MLTSRKFFPSLSSLRALEALDRLGSASAVAEELALTQSAVSRQLQTLEGQMGVELIRRDR
KRLSLTPAAQDYVTEIREALNRIAQASLRLQVAPAGGTVNLAILPTFGMRWLMPRLPEFS
RLHPDITINMTTRLRPFNFASEPFDAALHFGEPDWPGTDRLLLRAERVLPVCAPGLLPHG
APKSPADLLRLPLLHIQTRPRAWQDWFAQMGVTCPETLPGTLYDQFATIGQAALHGLGVA
LLPNYVVEQDLATGRLVAAYPDAVETLGAYYLVWPRARGNDPSLRAFRHWLAAQAEPEEG
LPR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcacgcaagttcttcccctccctgtcttcgctacgtgcgctcgaagcgctg
gaccggctcggctctgcctcggcggtagccgaggaactcgcactgacgcaaagcgcggtc
agtcgtcagttgcagacgctcgaaggacagatgggcgtggagctgatccggcgcgaccgc
aagcggctgtcgcttacaccggcggcgcaggattacgtgaccgagatccgcgaggcgttg
aaccggatcgcacaggcctcgctccggcttcaggtggcgccggcggggggcaccgtcaac
ctggcgatcctgcccaccttcgggatgcgctggctgatgccgcgccttcccgaattctcg
cgcctgcacccggatatcaccatcaacatgaccacccggttgcgaccattcaactttgcc
agcgaaccctttgatgcggcgttgcattttggtgaaccggactggcccggaaccgaccgg
cttctgctcagggcggaacgtgtgctgccggtctgcgcgccgggcctgctgccgcatggg
gcgccgaaatccccggccgacctgctgcgcctgccgctgttgcatatccagacccgcccg
cgcgcctggcaggactggttcgcgcagatgggagtcacctgccccgagaccctgcccggc
acgctttacgatcagttcgccaccatcggacaggcggcgctgcatgggctgggggtggcc
ttgctgcccaattacgtggtggaacaggatctggccaccggacgcctggtcgccgcctat
cccgatgcggtcgaaacgctcggcgcctattacctggtctggccacgggcgcgcggcaac
gacccgtcgctgcgcgcctttcgccactggctggcggcacaggccgagcccgaggagggc
ttgccgcgctaa
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