Ruegeria pomeroyi: SPO2033
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Entry
SPO2033 CDS
T00215
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPO2033 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sil01007
]
SPO2033 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO2033 (alaS)
Enzymes [BR:
sil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SPO2033 (alaS)
Amino acid related enzymes [BR:
sil01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SPO2033 (alaS)
Transfer RNA biogenesis [BR:
sil03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPO2033 (alaS)
Prokaryotic type
SPO2033 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DUF6026
ZapB
Motif
Other DBs
NCBI-ProteinID:
AAV95305
UniProt:
Q5LRU1
LinkDB
All DBs
Position
complement(2158895..2161567)
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AA seq
890 aa
AA seq
DB search
MPSLNDIRSTFLNYFAKQGHTIVPSSPLVPRNDPTLMFTNSGMVQFKNCFTGVDKRDYVR
ATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKSEAIPFAWELITRDFDI
PKDRLYTTVYHTDDEAFEIWKKVGVPESRIIRIATSDNFWQMGPTGPCGPCTEIFYDHGD
HIWGGPPGSPEEDGDRFIEIWNIVFMQNEKFEDGSMVDLDMQSIDTGMGLERIGALLQGS
HDNYDTDLFKALIEASADATSVDPYGDQNVHHRVIADHLRSTSFLIADGVMPSNDGRGYV
LRRIMRRAMRHAHLLGAKDPVMHRLVRTLVGQMGAAYPELGRAQALIEETLLLEETRFKQ
TLDRGLKLLDDELTALPEEAPLPGEAAFKLYDTYGFPLDLTQDALREKGRKVDTDGFDAA
MAEQKAKARAAWAGSGESTDNAIWFDVLDVAGATDFLGYDTEKAEGQALALVVDGALSDR
IAEGGSGWVVTNQTPFYGESGGQVGDTGVIRRLENRDHVALVEDSRKFADGKVYAHKVTM
ERGALAKGDAVELEVDHARRSAIRANHSATHLLHEALREALGDHVAQRGSLNAADRLRFD
FSHAKALTEAELAQVGAEVNRFIRQNSRVETRIMTPDDARAIGAQALFGEKYGDEVRVVS
MGRAETGKGADGKTWSIELCGGTHVAQTGDIGMFVLLGDSASSAGVRRIEALTGQAAFDH
LSQEGARLSQVTAMLKAQPAEVAERVRALMDERKALQNEVAQLRRDLAMAGGAGQGGGAE
THEVGGVPFLAQVLSGVSGKDLPALIDEHKSRMGSGAVLLIADAGGKAAVAAGVTEDLTA
RVSAVDLVKAAVAALGGKGGGGRPDMAQGGGQDAGKADAAIKAAEQVLGG
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctgaacgatatccgatcgacctttctgaactatttcgcgaaacaggggcac
acgatcgtcccgtccagcccgctggtgccgcgcaacgacccgacgctgatgttcaccaac
tcgggcatggtacagttcaagaactgcttcaccggggtggacaagcgcgattacgtgcgc
gccaccacggcccagaaatgcgtgcgcgcaggcggcaagcacaatgacctcgacaatgtg
ggctataccgcgcgccatcacacgtttttcgagatgctgggcaatttctcgttcggcgac
tatttcaaatccgaggcgatcccctttgcctgggagctgatcacccgcgatttcgacatc
cccaaggaccggctttataccaccgtctatcacaccgatgacgaggcctttgagatctgg
aagaaggtgggcgtgcccgagagccggatcatccgcatcgctacttcggacaatttctgg
cagatgggccccaccggcccctgcggcccctgcacagagattttctatgaccatggcgac
catatctggggcggccctccgggcagcccagaagaggatggcgaccggttcatcgagatc
tggaacatcgtcttcatgcagaacgagaagttcgaggacggctcgatggtcgatctcgac
atgcagtcgattgacaccggcatggggctggagcggatcggcgcgctgcttcagggcagc
catgacaattatgacaccgacctgttcaaggcgctgatcgaggcctcggccgatgccacc
agcgtcgatccctatggcgatcagaacgtgcatcaccgggtgatcgccgatcacctgcgc
tcgacttcgttcctgatcgcggatggcgtgatgcccagcaatgacgggcgtggctatgtg
ctgcgccggatcatgcggcgggcaatgcggcatgcgcatcttctgggtgccaaggacccg
gtgatgcaccggctggtgcgcacgctggtcggccagatgggcgcggcctatcccgagttg
ggccgggcgcaggcgttgatcgaggaaacgctgttgctggaggaaacccggttcaagcag
acgctggatcgtggtctgaagctgctggatgacgagctgaccgcgctgcccgaagaggct
ccgctgccgggcgaagcggcgttcaagctgtatgacacatacggttttccgctggacctg
acgcaggatgcgctgcgcgagaagggccgcaaggtcgataccgacgggttcgatgcggcc
atggccgagcagaaggccaaggcgcgcgctgcctgggcgggctcgggcgagtcgacggat
aacgccatctggttcgatgtgctggatgtcgcgggtgcaaccgatttcctgggttatgac
accgaaaaggccgagggtcaggcgctggcactggtggtcgatggtgcgctcagcgacagg
attgccgagggcggcagcggctgggtggtgaccaaccagacgccgttctatggcgaatcc
ggtggccaggtcggcgataccggcgtgatccgccgactggaaaaccgcgatcacgtggcg
ctggtcgaggacagccgcaagttcgccgatggcaaggtctatgcccataaggtgacgatg
gagcgcggcgcgctggccaaaggcgacgcggtcgagctggaggtggatcatgcccgccgc
agcgcgatccgggccaaccactcggccacgcacctgttgcacgaggcgctgcgcgaggcc
ctgggcgatcatgtggcccagcgcggctcgctcaacgccgcggaccggctgcggttcgat
tttagccatgccaaggcactgaccgaggcggaactggcgcaggtcggggccgaggtgaac
cggttcatccgacagaactcgcgcgtcgagacccggatcatgacgcccgacgatgcccgc
gccatcggggcgcaggcgctgtttggtgagaaatacggcgacgaggtgcgcgtggtgtcc
atgggccgggccgagaccggcaagggtgccgatggcaagacctggtcgatcgagctgtgc
ggcggcacccatgtggcgcagaccggcgatatcggcatgttcgtgcttctgggcgacagt
gcctcgagcgcgggtgtgcgccggatcgaggcgctgaccgggcaggccgcgttcgaccac
ctgtcgcaggagggtgcacgcctgtcgcaggtgaccgcgatgctcaaggcgcaaccggcc
gaggtggccgagcgggtgcgcgcgctgatggacgagcgcaaggccttgcagaacgaggtg
gcgcagctgcgccgcgatctggccatggccggcggggccgggcagggtggcggcgccgag
acgcatgaggtgggtggcgtgcctttccttgcacaggtgctgtcgggtgtgtcgggcaag
gacctgcccgcgctcattgacgaacacaaaagccgcatgggctcgggcgcggtgctgctg
attgcagatgctgggggcaaggccgctgttgcggctggtgtgactgaggatctgacggcc
cgtgtttctgcagtggatctggtcaaggcagcggttgcggcgcttggcggcaagggcggc
ggcggccggccagacatggcgcagggcggcggtcaggacgcgggcaaggcggatgcggcg
atcaaggccgctgaacaggtactgggaggataa
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