Simplicispira suum: C6571_08930
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Entry
C6571_08930 CDS
T05361
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
simp
Simplicispira suum
Pathway
simp00550
Peptidoglycan biosynthesis
simp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C6571_08930 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
simp01002
]
C6571_08930 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
simp01011
]
C6571_08930 (dacB)
Enzymes [BR:
simp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C6571_08930 (dacB)
Peptidases and inhibitors [BR:
simp01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
C6571_08930 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
simp01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C6571_08930 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AVO41399
UniProt:
A0A2S0MZU4
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All DBs
Position
1923723..1925255
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AA seq
510 aa
AA seq
DB search
MWGSGAMDTIIGAVADSGAHRLRRMLKCLPSLLSFSRPLCAFLVCTLAPSFWATAAAPPS
ATLPATVTAALSRAGVPREAFAALVVPADEGSSPRLNWQGDRPMNAASVMKLATTFAALD
LLGPAYTWSTPVFAQGPVRDGTLQGNLYLRGSGDPSLVMERLWLLLRRVQAHGIDAIAGD
IVVDGTAFAGAARDPAAFDGEPLRAYNAAPDALLVNFKSLVLDLVPDAAAGLARIQVAPP
MAGLAVQASVPLAPAGTRCGDWRAQMRLSLADPTRLAFQGQYPAACGERSWALAPPQPEL
FGPRAVAGMWLALGGRLGGSARLGKVPDGLAPLFVHSSAPLAEAVQNINKFSNNVMAQQV
FLTLGLEAGGVGSLDTARAALQTWWARRMGAAAMPVFDNGAGLSRETRISASSLARMLQR
AWASPVMPELMASLPIVGVDGTLRRSQSRAVGSAHLKTGSLQDVLAIAGYVHGDDGQRWV
LVALVNHDHAAAARPALDALIDWTRLASQR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggagcggggccatggacacgattatcggcgccgtggcggactctggcgcgcat
agactccggcggatgttgaagtgcctgccctccctgctttccttctcgcgcccgctctgt
gctttccttgtgtgcacacttgcccccagcttctgggcgaccgcagctgcgccgccttcc
gcaacgctgccagccactgtcaccgcagcgctcagccgcgctggcgtgccccgcgaagcc
tttgccgcgctcgtcgtgcccgctgacgaaggcagctcgccacgcctgaactggcaaggc
gatcgacccatgaatgcggcgtcggtgatgaagctcgccaccacttttgccgcgctggat
ttgctggggcccgcctacacctggagcacgcccgtgtttgcgcagggcccggtgcgcgat
ggcacgctgcaaggcaacctgtacctgcgcggcagtggcgaccccagcttggtgatggaa
cggctctggctgctgctgcggcgtgtgcaggcgcatggcattgacgccattgcgggtgac
atcgtggtcgatggcacagcgttcgccggtgctgcccgtgatccggcggcctttgatggc
gagccgctgcgcgcctacaacgccgcgccggacgccctgctggtgaacttcaaatcgctg
gtgctggacttggtgccagatgccgcagccggcctggcgcgcatccaggtggcgccacca
atggcaggacttgcggtgcaggccagcgtaccgctggcgcctgccggaacgcgctgcggc
gattggcgcgcacagatgcgcctcagcctggcagatcccactcggttggcttttcagggg
cagtacccagcagcttgcggcgagcgcagctgggcgctggccccgccccagcccgagttg
ttcgggccgcgtgccgtggccggtatgtggctggcgctgggtggcaggctgggcggcagc
gcacggctgggcaaggtgccggacggcctggcgccccttttcgtacacagctcggcgccg
ctggccgaggcagtgcaaaacatcaacaagttcagcaataacgtcatggctcagcaggtt
tttttgacgctcggtctggaggccggcggcgtcggcagcctggatactgcacgcgccgcg
ctgcagacttggtgggcacgccgcatgggcgccgccgccatgccggtctttgacaacggt
gcaggcctgagccgtgaaacgcgaatcagcgcgtcttcgctggcgcgcatgttgcagcgc
gcctgggcctcgcccgtgatgccggagctgatggcttcgcttcccattgtcggagtcgac
ggcaccctgcgccgcagccagagccgcgccgtgggcagcgcacatctcaagaccggcagc
ctgcaggatgtgctggccatcgccggttacgtgcatggcgacgacggccaacgctgggtc
ctggtggccctggtgaaccacgatcatgcggcggctgcccggccggcgctggatgcgttg
atcgactggacgcgtctggcaagccagcgttag
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