Stenotrophomonas indicatrix: DAIF1_16250
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Entry
DAIF1_16250 CDS
T07128
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00020
Citrate cycle (TCA cycle)
sinc00190
Oxidative phosphorylation
sinc00650
Butanoate metabolism
sinc01100
Metabolic pathways
sinc01110
Biosynthesis of secondary metabolites
sinc01120
Microbial metabolism in diverse environments
sinc01200
Carbon metabolism
Module
sinc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sinc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sinc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DAIF1_16250 (sdhA)
00650 Butanoate metabolism
DAIF1_16250 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
DAIF1_16250 (sdhA)
Enzymes [BR:
sinc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DAIF1_16250 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Thi4
Pyr_redox_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QBR44062
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Position
1785010..1786800
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAAKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFFDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQR
PFGGMTTQYGEGPAAQRTCAAADRTGHAMLHTLYQQSLKHDARFMIEYFALDLIFDDEGA
CRGVLALDMSDGTLHLFRAQGVVLATGGYGRAYFSATSAHTCTGDGGGLAMRAGIAMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDDKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVRKDGENPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAATITPGAAHKTLPADACDKALGLLDKLRHANGDTPTSVIRDRMQRTMQADAAVFRTS
QTLKEGCEKMDKIFDSFQDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVSVDEKGKCSFDYRPVHMYTLTDDVSVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagattaccgaacacaagtacgacatggtcgtggtgggcgccggcggc
gccggcctgcgtgccacgttcggcctggccgccaagggcctgcagaccgtgtgcctgacc
aaggtcttcccgacccgttcgcacaccgttgccgcccagggcggtatctccgctgcgctc
ggcaacatgggcgaggacgactggcgttaccacttcttcgacaccatcaagggttcggac
tggctgggcgaccaggacgccatcgagtacatgtgccgtgaagcgattccggcgatcatc
gagctcgagcactacggcgtgccgttcagccgcaccgccgaaggcaagatctaccagcgt
ccgttcggtggcatgaccacccagtacggcgaaggcccggcggcgcagcgtacctgcgcg
gcggccgaccgtaccggccacgcgatgctgcacacgctgtaccagcagtcgctgaagcac
gacgcacgcttcatgatcgagtacttcgcactcgacctgatcttcgatgacgaaggcgcc
tgccgtggtgtgctggcgctggacatgtccgacggcacgctgcacctgttccgcgcccag
ggcgtggtgctggccaccggcggctacggccgcgcctacttcagtgccacctcggcgcac
acctgcaccggcgacggtggcggcctggccatgcgcgccggcatcgccatgcaggacatg
gagttcgtgcagttccatccgaccggcatctacggcgccggctgcctgatcaccgagggc
gtccgcggtgaaggcggcatcctgcgcaacagcagcggcgagcgcttcatggagcgttac
gcaccgcactacaaggacctggcttcgcgcgacgtggtcagccgttcgatgaccatcgag
atccgcgaaggccgtggcgtgggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccgggcgtgatcgacgacaagctgccgggcatcgccgagagcgcgcgcatcttc
gccggcgtcgacgtgcacaagcagccgatcccggtgattccgaccgtgcactacaacatg
ggcggcatcccgaccaactaccacggtgaagtggtgcgcaaggacggcgagaaccccgat
gcggtcgtgccgggcctgtacgccatcggcgaagcggcctgcgtttcggtgcacggtgcc
aaccgcctgggttcgaattcgctgctggacctggtggtgttcgggcgtgcggtggccaac
cgttgcgcggcgacgatcaccccgggcgcggcgcacaagaccctgccggccgacgcctgc
gacaaggcgctgggcctgctggacaagctgcgtcacgccaacggcgataccccgacttcg
gtcatccgcgatcgcatgcagcgcaccatgcaggccgacgcggcggtcttccgtaccagc
cagacgctgaaggaaggctgcgagaagatggacaagatcttcgattcgttccaggacgtg
aaggtctccgaccgttcgctggtctggaactcggacctgatcgagacctacgagctgaac
aacctgctgctgaatgcagtggcgacgatcaactcggccgagcagcgcaaggaaagccgc
ggcgcacacgcgcacgaggacttcccggaccgcgacgacgtcaattggcagaagcacacc
ctggtcagcgtggacgagaagggcaagtgcagcttcgactaccgtccggtgcacatgtac
acgttgactgatgacgtgtccgtggtgccgccgaagccgcgcgtgtactga
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