Sesamum indicum (sesame): 105160375
Help
Entry
105160375 CDS
T04135
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105160375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sind04040
]
105160375
Ion channels [BR:
sind04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105160375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
105160375
NCBI-ProteinID:
XP_011076015
UniProt:
A0A6I9T6E6
LinkDB
All DBs
Position
LG4:complement(9233221..9240002)
Genome browser
AA seq
711 aa
AA seq
DB search
MDYHRDKFVRFKDWRSEKSFNGESPSRGGRQLARLRSAVCSVSDKFQRGLESGSERIKKF
TGSIRSFSFGKFQDEGSRKKILDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYIPIINDNK
KCLDLDRKLELAACILRSFTDIFYLIHIIFQFRTGFIAPSSRVFGRGVLVQDSWEIAKRY
LSSYFIIDILAVLPLPQIVILIVIPNLKGSRSLNTKNLLKFVVFLQYIPRVLRVYPLYGE
VTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWERACGDRSACKDAS
FYCEADHTGFIQFLNESCPVQTANTTLFDFGIFLEALQSGIVESKDFPQKFFYCFWWGLQ
NLSSLGQNLQTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRRDA
EQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEENLIHNLPRDLRRDIKRHLCLALLKRV
PMFEKMDDQLLDAMCDRLKPVLYTEDSYIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFF
NSDYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQALSEVEAFALMADDLKFVASQFRR
LHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCRKKLEESLREEENRLQDALAKGGSSSP
SLGATIYASRFAANALRALRRNGTRKTRMPERISPMLLQKPAEPDFTAEDK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggattaccaccgggataagtttgttaggtttaaagattggagatcagagaaaagtttt
aatggagaatcaccctctagaggtggacggcaacttgccagacttagatcagcagtatgc
tcagtttcagacaaattccagagaggactagaatctggctctgagagaatcaagaagttc
acaggatcaataagatccttctcttttggaaagtttcaggatgaggggtctaggaagaaa
attcttgatcctcaaggaccgtttcttcagaaatggaataagatttttgtattatcatgt
gtgattgctgtctccttggatcccttgtttttctacattcccattattaacgataataaa
aagtgtcttgatttggaccggaaattggaactcgctgcttgcattcttcgatcctttaca
gatatcttttacctcatacatattatttttcagttccgtactggtttcatcgccccttct
tcacgtgtatttggaagaggtgtcctagttcaggattcctgggaaatagcaaagagatat
ctatcgtcgtactttataattgacattcttgccgttctgccacttccacagatagtaatt
ctcatcgtcattcccaatttgaaaggttcaagatctttgaacacaaagaatttgttaaaa
tttgtggtcttcctccaatacataccaagggttctccgagtctatcccttatatggtgaa
gtcacaagaacttctggcatactcactgagacagcatgggctggagctgccttcaatctt
tttctttacatgcttgccagtcatgtgcttggagccttttggtatttgttctcaatagaa
cgcgaaactacttgctgggagagagcttgtggggatcgatctgcatgtaaagatgcttcc
ttttattgtgaggctgatcacacaggattcatacaattcttgaatgagtcctgccctgta
cagactgctaatactacgctttttgactttgggatattccttgaagcccttcaatctggt
attgttgaatcaaaagattttcctcagaagttcttttattgtttctggtggggactacag
aatttaagttcccttggtcagaaccttcaaacaagtacctatgtgtgggaaatttgcttt
gcagttttcatatctatatctggcttggtgctgttttcgtttctgattgggaatatgcag
acatatttgcagtctacaacactgagattagaggagatgagggtgaaaagaagagatgca
gagcaatggatgtctcatcgtctgcttcctgatagcttgagggagcgaatcagaaggtat
gaacaatacaaatggcaggaaactaggggtgtcgacgaagagaatcttattcataatctt
cccagggacctcagaagagatataaagcgacatctctgtttagctttactcaaaagagtg
ccaatgtttgagaaaatggatgatcaactcttggacgcaatgtgtgaccgtctgaaacca
gtactttacactgaggatagctacatagtgcgggagggtgatccagttgatgagatgcta
tttattatgcgtggcaaactgttgaccgttactacaaatggagggaggactgggtttttt
aactccgattatctaaaagcaggtgacttttgtggtgaagagctcttaacttgggctcta
gaccctcattcatcgtccaatctcccgatttccaccagaacagttcaagccctctcagag
gtcgaagcatttgctttgatggctgatgatttgaagttcgtagcctcccagttccgacga
ttacatagtaaacagctgcgtcatacttttaggttttactcgcagcagtggagaacttgg
gctgcttgttttatacaagccgcatggcgccgttattgcaggaagaagctagaagaatct
ctccgcgaagaagaaaaccggttgcaagatgctttggcaaaaggcgggagcagttctccc
agcttgggtgcaacaatttacgcatctagatttgcggctaatgcacttcgggctttgcga
cgcaatggtaccagaaagacaaggatgccggagagaatatctccaatgctacttcagaag
ccagctgaaccagattttaccgctgaagataaatga
DBGET
integrated database retrieval system
