Sesamum indicum (sesame): 105162713
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Entry
105162713 CDS
T04135
Name
(RefSeq) zinc finger protein VAR3, chloroplastic isoform X1
Organism
sind
Sesamum indicum (sesame)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RanBP
Mitoc_mL59
Prim_Zn_Ribbon
TEX13_ZnF
Motif
Other DBs
NCBI-GeneID:
105162713
NCBI-ProteinID:
XP_011079113
UniProt:
A0A6I9T7D3
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Position
LG5:16561400..16565812
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AA seq
888 aa
AA seq
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MGGGVTRFMTLLITPFPPLRPSLILLNRRVSSLSAAPVRLLTLSSPPNTKPPTPQLLNSF
HSQSSNNTYTLSSSAAQHHPWPEWTHFLSVLPSGQGASAPEEYRILPEDAFVVYEELPDD
FVRAAATCLAFARARPNLLGLLSKRDIEAVVSNGTPFLFKSALDTARRMRAFLAPDESNV
AEFDKANTVDLMKYIISYASNPTVSFERNGLYSRELVDSSVRYLLHELVAVSSGAQTGYM
PASDNQFSDRDGQTRKPFGQNIEMKRGDWICRKCSFMNFARNMKCLECEEPRPKRQLTGR
EWECPQCNFFNYGRNLACLRCDCRRPGAPLFKINNPQSVSGYNGDYASKSNTENRLAENE
EKAQRWFSKISQLNNATDINTAASDEDFPEIMPLRKGDNRFVDSMRKTPLDRRIVKSQHQ
NSSSSSGNPEGTNSRLDASISRSLDHILGHSSTDSETDAAGITPEQNITEFSSSPSQSGS
SDFQYSRSSSPNHVPLVPLPADTFSSRDQTSEMDDGKKVPIEFHETGSSAVRNQTTMISE
SQSSGQNFQAPKSSAHPIDIQNKEKEQAEKSERWFKRIAELHNVKDLPSAVSDEDFPEIM
PMRKGENRFVVGKKKDRSLTSPKYKRQVAMEQANNTTFVPFVPFPPGYFARKDTQQPTGQ
DSPVKSVGKTSTSNITAETDKLDDLKNGTADTSTVQRNDYKPMSRANATLPSEIVAEVRN
PPRAHNQSVSSTSQFSGDNATPAAGSSSQSSITSPTISSNTGNDGPCGTTPTRGVSSQPP
KNENVQSSWTTKSLEGSAVKEDPDPLDMSEEAKAERWFKRVAQIKDISELSQIPDEDFPS
IMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPIVSSDSVKKESDNS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggagtaaccaggttcatgaccctcctaatcaccccctttccgcctctccgc
ccatccctcatcctccttaaccgccgtgtctcctccctctcagctgctccagtccgtctc
cttaccctctcttcccctcccaataccaaaccccctactccgcaactcctcaactccttt
cactctcaatctagcaataatacatacacactcagctcctccgccgctcagcatcatccc
tggcccgaatggacgcattttctcagtgttttaccgagtgggcagggagcctctgctcct
gaggagtatagaattctacccgaggacgcgtttgtcgtgtatgaggaattgcctgatgat
tttgtacgcgccgctgcgacgtgcttggctttcgctcgggctcgaccgaatctacttggg
ctactttcgaagagggatattgaagcagttgtatcgaatggaactccatttctgttcaaa
agtgcgctggacacagcaaggaggatgagggcatttttggcacctgatgaaagcaatgtt
gctgaatttgataaagcaaatacagttgatctcatgaagtatataataagctatgcaagc
aatcctactgtttcttttgaaagaaatgggctgtatagtagggagcttgttgactcgtct
gttcggtatctgttgcatgagctggttgcagtaagctccggagctcaaacaggttacatg
cctgcttcagacaatcagttttcagatagagatggacaaactcgcaagccttttggacaa
aatattgaaatgaagcgaggcgattggatatgccggaagtgcagctttatgaactttgca
agaaacatgaaatgccttgaatgtgaagaacccagaccgaagaggcagctaactggcagg
gaatgggagtgccctcaatgcaatttctttaactatggaaggaatttggcttgcttaaga
tgtgactgccgacgacctggtgctccattgtttaaaatcaataatcctcaatctgtttct
gggtacaacggagattatgcttctaagtccaacacggaaaacagattagcagagaatgaa
gagaaggcacaacgctggtttagtaaaatttcccaactgaataatgcaactgatatcaat
actgcagcctctgatgaagattttccagaaatcatgccattgaggaaaggagataatagg
tttgttgatagcatgaggaagacaccattggatagacggattgtcaagtctcagcatcaa
aatagctcaagtagcagtggcaatcccgaaggtacaaactctagactagatgcatcaatc
agccgtagtctggaccatattcttggccactcatccactgattctgaaaccgatgctgca
ggcattactcctgaacaaaatataacagagttctcctcttcaccatctcagtcaggttct
tcagattttcaatattcacggagcagcagccccaatcatgttcctcttgtgcctctccct
gcagacacattttctagcagagatcaaacttcagagatggatgatggaaagaaagtacct
atagaatttcatgaaactggctcatctgcggtcaggaatcaaacaaccatgatcagtgag
tctcagagttcaggtcagaattttcaggccccaaagagttcagcacatccaattgatatc
cagaataaagagaaagagcaagctgaaaagtcagaaagatggttcaagaggatagcagaa
ctgcacaatgtcaaagatcttccaagtgcggtctcagacgaggacttccctgagattatg
ccaatgcgtaagggagaaaaccggtttgtggttggcaagaagaaagaccgttcactcact
tctccaaagtacaaaagacaggttgccatggagcaggcaaacaatactacttttgtaccc
tttgttccattccctcctggctactttgctagaaaggatacacagcagcccaccggccaa
gattcaccagtaaaatctgtcggtaagacctctacaagtaacataactgcagagactgat
aagttggatgacttaaagaatggaactgctgatacaagtactgtgcaaaggaacgattat
aaaccaatgagccgagcaaatgccacgcttcccagtgaaattgtggctgaggtaaggaat
cccccgagagcgcataaccaatcagtgagctccacttcacagttctctggtgataatgca
acacctgctgctggaagctcttcccagagctccattacttcccctaccataagcagtaat
acgggaaatgatggaccttgtggaaccactccaaccagaggagtttcatcccaaccaccc
aaaaacgagaacgttcaaagtagctggaccacaaagagcttggaggggtcagctgtgaag
gaggaccctgatcctttggacatgtcagaagaggccaaagctgaaaggtggttcaaacga
gtagctcagataaaggatatctctgagttgagccagatcccagacgaagacttcccctcg
ataatgccaatgcggaagggtgtgaacaggtttgtcgtaagcaagagaaaaacacccctt
gaaaggaggctgacatcccagcaatacagaagaaatcttcctattgtgagtagtgattct
gtgaagaaggaaagtgacaacagctga
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