Sesamum indicum (sesame): 105164452
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Entry
105164452 CDS
T04135
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105164452
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105164452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
T2SSE
AAA_19
AAA_29
Motif
Other DBs
NCBI-GeneID:
105164452
NCBI-ProteinID:
XP_011081405
UniProt:
A0A6I9TCN1
LinkDB
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Position
LG6:complement(11503046..11520028)
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AA seq
792 aa
AA seq
DB search
MEDDTGEKSSFIVGIIENRAKEVGVAAFDLRSASFHLSQYIETSSSYQNTKTLLNFYDPM
VIIVTPTKLAPDGMVGVSELVDRFFSSTTKVMMARSCFDDTRGGALVKNLAAKESSALGL
DTYYKQYYLCLAAAAATIKWIEAEKGVIITNHSLSVTFNGSFDHMNVDATSVQNLEIIEP
MHSSLWGTNNKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIDTINARLDCLDELMSNEQ
LFFGLSQALRMFPKETDKVLCHFCFKQKKVTNGVLAIDNSRKSQILISSIILLKTALDAL
PLLSKALKDANCFLLRNVYKSICANEKFSSMRERIGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKLPNLKIPYNKRQGFYFSIPQKDIQGK
LPSKFIQVIKHGNNIHCSSLELASLNVRNKSAAKECYIRTEFCLEALMDAIREDVSVLTL
LAEVLCLLDMIVNSFAHTISMKPVDKYTRPQFTYDGPLAIDSGRHPILESVHNEFVANNI
FLSEASNMIIVTGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATLRVVDRIFTRMGTMD
SVESNSSTFMTEMKETAFILQNASHRSLIVVDELGRATSSSDGFAIAWSCCEHLLALRAY
TIFASHMENLSELATIYPNVKIVHFDVEIKNKRMDFKFRLKDGPRHVAHYGLMLAGVAGL
PSSVIESAQSITSKITEKEVKRIELNFQQHHDIQMAYRVAQRLICLKYSNQDEDSIRQAL
QNLKESYINGGL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatacaggagagaaatccagcttcatcgttggtatcattgagaaccgcgcc
aaagaggttggagtggctgcatttgacttgaggtcagcttcatttcacctttctcagtat
attgagacgagcagctcataccagaacacaaaaacactactgaatttttatgatcctatg
gtgattattgttacacctactaagctggctcctgatggcatggttggagtttctgagctg
gttgacagatttttctcttcaaccacaaaggttatgatggctcgcagttgctttgatgac
accaggggtggtgctctagttaaaaacttggcagccaaggaatcatctgctcttggtttg
gatacttattacaagcaatattatctatgcttggctgcagctgctgcaaccatcaagtgg
atagaagcagagaagggagtcatcatcactaaccactcattatctgttacttttaatgga
tcattcgaccacatgaatgtagacgccactagtgtccagaacttggaaatcattgagccg
atgcactctagtctttggggcactaacaacaagaagagaagtctatttcatatgctcaag
acaacaaggaccattggagggactagactattgcgagccaatcttttgcagcctctcaaa
gacattgacactatcaatgcccgacttgattgcctggatgagttgatgagcaatgagcag
ctgttctttggcttgtcccaggctcttcgtatgtttccaaaggaaactgataaagtcctt
tgtcatttttgctttaagcaaaagaaagttactaatggggtcctggccatagacaactcc
agaaagagccaaatattgatctcaagcattattcttcttaaaacggctctagatgcatta
ccattactctccaaggcgcttaaggatgccaactgttttctactcagaaatgtttacaag
tctatatgtgcaaatgaaaaattttcttccatgagggaaaggattggagaggttattgat
gaagatgttcttcatgcacgtgtcccttttgttgctcgaactcagcagtgttttgctgtc
aaggcaggaattgatgggctactagatattgcacgcagatctttctgtgacaccagtgaa
gcgatacataacttggccaacaagtaccgagaggatttcaagctgccgaatttgaaaatc
ccatacaacaaaaggcaaggtttctactttagcatacctcagaaggatatacagggaaaa
cttcccagcaagttcatccaggtcataaaacatggaaacaacatacattgctcttctctg
gaactggcctctctgaatgtaaggaacaagtctgcagctaaagagtgctatatccggact
gaattttgcctggaagccttaatggatgccataagggaggatgtctctgtgctcactctt
ctagcggaggtgttatgccttctggatatgatagttaattcatttgctcatacaatatcc
atgaagccagttgacaaatatactagacctcagtttacgtatgatggtccattggcaatt
gattcaggaaggcacccaattcttgaaagtgtccacaatgagtttgttgcgaacaacatt
tttctgtctgaagcatcaaatatgataattgttacaggcccaaacatgagtggaaagagt
acttatcttcaacaagtttgcttggtagtcatccttgctcaaattggttgttacgttccc
gcccgctttgcaacattaagagtagttgatcgcatatttactaggatgggaactatggac
agtgttgaatcaaattccagcacgtttatgacagagatgaaggagacggcgtttatcttg
caaaatgcttctcataggagtctcattgttgtggatgaattaggaagagcaacatcttcc
tctgatgggtttgcaattgcatggagttgctgcgagcatctgctcgctttaagagcgtac
actatctttgcttctcatatggaaaacctatctgaattggccaccatttatccaaatgtc
aaaattgttcacttcgacgttgagattaagaacaaacggatggatttcaagtttcgactg
aaagatgggccgaggcatgtagcacactatggcctcatgctagcaggagtagctggactg
ccaagttctgtgatagagtctgctcaaagcatcacatcaaagattaccgaaaaggaagtg
aagagaatagagcttaatttccagcagcatcacgatattcaaatggcttaccgtgttgct
caaagactcatatgcctcaaatattccaaccaagatgaggactcaatccggcaagcactg
cagaatcttaaagaaagttatattaacggcgggctttaa
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