Sesamum indicum (sesame): 105166186
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Entry
105166186 CDS
T04135
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105166186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105166186
03036 Chromosome and associated proteins [BR:
sind03036
]
105166186
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105166186
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105166186
PBAF complex
105166186
GBAF(ncBAF) complex
105166186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
105166186
NCBI-ProteinID:
XP_020551237
UniProt:
A0A8M8UXS4
LinkDB
All DBs
Position
LG1:13611097..13614362
Genome browser
AA seq
531 aa
AA seq
DB search
MNNHSMNSNNNSVRANFAFGTPGGMQMPMQIPMSSQQQVPHLSQSQPQGRPYFPGHFQLS
EPQVQAFPQSQSAQAQVQILAPSQTNTNIGVSSPSMSTPGSGTAGTGKRLQKPPSRPSGG
SSGQGTASPMKTMELAPAVRRGKRKLPDKVIPDKVAAIFPESALYNQLLEFESRVDAALA
RKKVDIMETLKNPMRAQKVLRIYVFNTFANQTGIDSLKENAGPPSWSLRIIGRILEDGKD
PTMEGPMKRSSFSYPKFSSFFKKITIYLDQNLYPDNHVILWESSRSPVLHEGFEVKRKGD
KEFTAIIRLEMNYVPEKFKLSPALQEVLGIEVETRPRIMAALWQYVKMKKLQISGDTSFF
MCDPPLRKVFGEEKLKFSMVSQKITPHLTPPGPIHLEHRVKLSGASPAGNTCYDVLVDVP
LSVEDMSSFLANLEKNKVIDACDEAISSSVKKIHEHCRRRAFFLGFSQSPSEFINALIAS
QARDLKLASADASREVEKERRAEFYNQPWIEDAVIRYLNRKPAVGSDAGNK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcatagtatgaacagcaataacaattcagttcgggcgaattttgcttttggc
actccaggggggatgcaaatgccaatgcaaatacccatgagtagccaacaacaggtaccc
catctgtctcagtcacaacctcaaggcaggccctacttccctgggcattttcaattgtca
gaacctcaagttcaggcctttccccagtcccagtcagctcaagctcaagtgcaaatcttg
gccccatcccagactaatactaacattggtgtctcatccccctccatgtccacgccaggt
tccggaacggcaggaactgggaaacgccttcagaagccgccttctcgaccttcgggggga
tcatctggtcagggcactgcttctcccatgaaaaccatggaactggcccctgctgtgcgt
agagggaagcggaagcttcctgataaagtaattccagataaagttgcagctatatttcca
gaatctgctctttataatcaattgcttgaatttgagtctcgtgtagatgctgcccttgcg
agaaaaaaggttgacattatggaaaccctgaaaaaccctatgcgagcacaaaaggttcta
cggatttatgtcttcaatacatttgcaaaccaaacagggatagattcactgaaggaaaat
gctgggccgccttcatggtctctccggataattgggaggattttagaagatgggaaagat
cctactatggaaggaccaatgaagagatcaagcttttcctatccaaagttctcatctttc
ttcaagaaaattactatatacttggatcaaaatttgtacccagataatcatgtaatctta
tgggagagttcccgatcgcctgtgcttcatgagggctttgaggtgaagagaaaaggtgac
aaggagttcactgcaattattagattggaaatgaattatgtgcctgagaaatttaagctc
tctcctgcattgcaagaagttcttggaattgaggtggagacacgtccaagaatcatggcg
gcactttggcaatatgtaaagatgaaaaaattacagatttccggcgacacttcttttttc
atgtgtgatccacctctaaggaaggtgtttggagaagaaaaattgaagttctccatggtc
tctcaaaagataacaccacaccttactccacctgggccgatacatttggagcatagggta
aagctttcaggggctagtcctgctggaaatacttgttatgatgttttggttgatgttccc
ttgtcagtagaggacatgtcaagtttcttggctaatttagagaagaacaaggtgattgat
gcatgtgatgaagcaatttcttcttctgtgaagaaaatacatgaacattgtcgaaggcga
gctttctttctcggatttagtcagtcaccttcagagttcattaatgccttaattgcttct
caagcaagggatttgaagcttgcctctgctgatgccagtcgtgaggtggagaaagagcgt
cgggcagaattctacaatcaaccttggattgaagatgccgttatccggtacctaaatcgc
aagccagctgttgggagcgatgctggaaacaaatag
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