Sesamum indicum (sesame): 105170768
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Entry
105170768 CDS
T04135
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105170768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105170768
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105170768
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
ANAPC4_WD40
zf-RING_2
PROPPIN
Motif
Other DBs
NCBI-GeneID:
105170768
NCBI-ProteinID:
XP_011089977
UniProt:
A0A6I9TY05
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Position
LG9:6122828..6136296
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AA seq
950 aa
AA seq
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MSPKPPENGMEGDDEREEESEEENSEEEEEDEPRLKYQRMGGSVPTLLQSDAASCVAIAE
RMIALGTHSGSVHILDFLGNQVKEFIAHTAAVNDLCFDIEGEYIASCSDDGSVVISSLFT
DERMKFEYHRPMKTIALDPDYVRKSSRRFVTGGLAGHLYFNVKKWIGYRDQVLHSGEGPI
HSVKWRASLIAWANDAGVKVYDAANDQRVTFIERPRGSPRPELLLPHLVWQDDTVLVIGW
GTSVKIVSIRSNQNKGANGTYKNIQMSSMNQVDIVASFQTTYFISGIAPFGDSLVVLAYI
PVEEDGEKDFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPIHGFEHYKAKDYSLAHAP
FSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDTEDHISWLLQHGYHEKALAAVEAGQG
RSELLDEVGTRYLDHLIVERKYAEAASLCPKLLRGSASAWERWIFHFAHLRQLPVLVPYI
PTENPRLRDTAYEVALVALATNTSFHKDLLSIVKTWPPVIYSALPVISAIEPQLNTSSST
DALKEALAELYVIDGQYEKAFSLYADLMKPDIFDFIDNHDLHDAIREKVAQLMMIDCKRA
VPLFIQHRDLISPSDVVSQLRAAKNKCDYRYFLHLYLHSLFEANPHAGRDLHDMQVELYA
DYDPKMLLPFLRSSQHYTLEKAHEICVKRDLLREQVFILGRMGNAKQALAVIINKLGDIE
EAIEFVSMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRD
RLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYKEARRAICLSNEEDEFRTKRDNKNR
SSQFAERSMSIRTMEVKSKVRGGTRCCMCFDPFAIHDVSIYVFFCCHAYHETCLMDSIDS
IISKKKPVARTHTQDELSYYQYDNSDEEDEDEDGNDDARVRCILCTTAAG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgaagccaccagagaacggaatggaaggcgatgacgaaagagaagaagagtcg
gaagaggagaattcggaggaggaggaggaggatgagccgaggcttaagtaccagcggatg
ggcggcagcgttcccacgctcctccagagcgacgccgcttcatgtgttgccattgccgaa
cgcatgatcgctctcggcacccactccggctccgtccacattcttgattttcttgggaac
caagttaaggaattcattgctcatactgctgcagttaatgatctttgctttgatattgaa
ggagaatacatcgcaagctgctccgatgatggttctgttgtaattagtagtctttttact
gatgaaagaatgaaatttgagtatcatcgccctatgaagaccattgctttagatcccgat
tacgtgaggaaatcatccagaagatttgttactggaggtttagctggtcatttatatttt
aatgtgaagaaatggataggctacagagaccaggttttgcactctggagaaggcccaatt
cattcagtgaagtggagagctagtctgattgcttgggctaatgacgctggtgtaaaagtt
tatgacgctgctaatgatcaacgtgtaacattcatcgaaagacctcgaggaagccctcgc
cctgagcttctgctccctcatttagtttggcaggatgatactgtgctggtcattggatgg
ggaacctctgttaaaatagtatcaataagaagtaatcagaataaaggcgccaatgggact
tacaagaatatccagatgtctagcatgaaccaggtggatattgtggcatcttttcagacc
acctatttcatttcaggaattgctccctttggtgattctttggttgttctggcatatatc
cccgtggaagaagatggagagaaggacttcagtagtactattccttcacgtcagggaaat
gctcaaagacctgaagtgagagttgtcacttggaataatgatgaactggcaactgatgca
ctacctattcatggatttgagcattacaaggccaaagattattcccttgctcatgctcct
ttttcaggtagcagttatgcaggtggtcaatgggctgctggtgatgaaccattgtactat
attgtgtccccaaaggatgtagttattgctaaacctagggacacagaagatcacatatct
tggcttcttcaacatggatatcatgagaaagctttagcagcagttgaagctggtcagggt
cggagtgagctgcttgatgaggtgggaactagataccttgaccatcttattgtggaacgc
aaatatgctgaagcagcatctttatgtcccaaattactgcgaggatcagcttctgcatgg
gaaaggtggattttccatttcgctcatctccgtcaacttcctgtactggtgccctacata
ccaacagagaacccaaggttacgtgatactgcttatgaggttgctcttgttgctttggca
acaaatacatcatttcacaaggatctcctgtcaattgttaaaacttggcctcctgtaatt
tactctgctttgcccgttatctcagctatagaacctcagctcaatacttcatcgtcgact
gatgctctcaaagaggctctcgctgagctatatgtaattgatgggcaatatgagaaagcc
ttcagcctatatgctgatcttatgaaaccagacatatttgacttcattgacaatcatgat
ttgcatgacgccattcgagaaaaggttgcccagctgatgatgatagactgcaaacgtgca
gttccattgtttatccagcacagagacctcataagcccatctgacgtagtttcacaactt
agggctgcaaagaataagtgtgactatcgatacttcttgcatttgtatctgcattcactg
tttgaggcaaatccccatgctggaagggatctccatgacatgcaggttgagctctatgcc
gattatgatccaaaaatgctgcttccctttcttcggagtagtcagcattatacattggaa
aaggctcatgaaatttgtgttaaaagagatctattaagagagcaagtctttatccttgga
agaatgggaaacgcgaagcaagctttagcagttattataaataaattgggggatatagaa
gaggctatagaatttgtaagtatgcagcatgatgatgaactctgggaagagctgatcaag
cagtgtctaaacaaacctgagatggtgggggtattgttggagcatactgttggcaatctt
gatccgctttatattgtaaatatggtgcccaatggcttggagatacctcggctgcgtgac
cgtctagtcaaaattatcacagactacaggacagaaacttctcttagacatgggtgcaat
gatatactcaaggcagattgtgtcaatttgctgattaaatattacaaagaagcaaggcgt
gctatatgcttaagcaacgaggaagacgagttccgcaccaaaagggataataaaaacagg
tcctctcagtttgctgagagatctatgagcatcagaaccatggaggtcaagtcaaaagtc
aggggtggaacaaggtgttgcatgtgttttgatccgtttgccatacatgacgtgtcgata
tacgttttcttttgctgtcatgcgtaccatgagacgtgtctgatggattccatagattca
attattagcaaaaagaagccggtagcccgaacccatacccaggacgagttatcatattat
caatatgataacagtgatgaagaagatgaggatgaagatggtaatgatgatgctcgggta
cgttgtatcttgtgcactaccgctgctggttga
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