Sesamum indicum (sesame): 105173088
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Entry
105173088 CDS
T04135
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105173088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sind04040
]
105173088
Ion channels [BR:
sind04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105173088
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
105173088
NCBI-ProteinID:
XP_020553229
UniProt:
A0A8M8VAA7
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Position
LG11:complement(498750..502533)
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AA seq
717 aa
AA seq
DB search
MNISGKKYVRFKDCNSESSFSSEGQSNRGLFPLRKPNFRPIVGGIRRAFDRSSERIKNLR
IRSIDWGHTRSNRPKSSPRKKVLDPQGPFLQRWNKIFVISCLIAVSLDPLFFYTPVVDAK
KFCLSLDENLEITACVLRSFIDIFYIFHIVLQFHTGFIAPCTRVFGRGELIEDRRAIAKR
YLSSYFIVDILSILPLPQLVILIVIPSVNAPISLATKDLLKIVIFAQYIPRCLRIYPLFK
EVNRTSGLFTETAWAGAAFNLLLYMLASHVFGSFWYLIAIERKDRCWRNACRDHNGCNLN
DLYCGEDRGDTSFLNSSCPLLEPNEIKSPADFDFGIFLDVLQSHVAEHRDFSKKISYCFW
WGLRNLSSLGQNLKTSTFVGEILFAVFISIVGLVLFSLLIGNMQKYLQSITVRIEEMRMK
RRDAEQWMSHRMLPENLRARIRRYEQYKWQENRGVEEESLIRNLPKDLRRDIKRHLCWTL
LTRVPMFEKMDEQLLDAMCSRLKPVLYTENSFIVREGDPVDEMLFIMRGNILTMTTNGGR
TGFFNSVYLMAGDFCGEELLTWALDPNSSSSLPISTRTVQAVKDVEAFCLMPDDLKSVTS
QFRRLHSKQLQHTFRFYSQQWRTWGACFIQAAWRRHYRRKIEKMLREAEDRLQNALAKEG
SGSLPSLAATVYASRFATNMLGNLRRNHPHNNISSPKLPPLLLQKPAEPDFSAENPS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcagtggaaagaaatatgtaaggttcaaggactgcaattccgagagttctttc
agttctgaagggcagtcgaatcgcgggctatttccattaaggaaaccaaatttcagacca
atagtcggtggaataaggagagcgtttgacagaagttctgaaaggataaaaaacttgaga
atacggtccatagattggggccacacccgaagcaataggccaaaatcaagcccgaggaag
aaagtacttgatcctcaagggccttttcttcagaggtggaacaaaatatttgttatttct
tgtttgattgcagtatccctggatccgctgttcttctacacaccagtcgtagatgccaag
aaattctgtctatctctggacgagaatttggagatcactgcttgtgttctccggtcattc
atcgacattttctacatatttcacattgttttgcagtttcatactggattcattgcccct
tgtactcgagtatttggaaggggtgagctgatcgaggatcgtagagctatagccaaacgg
tatctctcgtcctacttcattgtagacattttgtcaattcttcctctacctcagctggtc
attctgattgtgatccccagtgtaaatgctccaatttctctggccaccaaagacctcctg
aagatcgttattttcgcacaatacatcccaagatgtcttcggatttatcccttattcaag
gaggtcaatagaacttcaggcctatttactgaaacggcctgggctggagctgctttcaat
ctcttactctacatgcttgccagtcatgtctttggatcattctggtatctgatcgcaata
gaacgcaaggacagatgttggcggaatgcatgccgtgatcataatggttgtaacttaaac
gatctttattgtggagaggaccgtggagacacttcatttctgaattcttcatgtccgctt
ctcgagcctaatgagataaagagccctgcagactttgacttcggcatctttcttgatgtt
cttcagtcacatgtggctgaacacagagacttctctaagaagatctcctattgcttttgg
tggggattgcgaaatttgagttcattgggtcagaacctcaaaacaagcacttttgtagga
gagattcttttcgccgttttcatctccattgttgggctggttctgttttcgttgctcata
ggcaacatgcagaaatatttacagtccatcactgttaggatagaagagatgagaatgaaa
cgtcgggatgcagaacagtggatgtcgcatcgtatgcttcctgagaacttgagggctcgt
ataagacgatacgagcagtacaaatggcaagaaaacagaggcgttgaggaagaatccttg
atccgtaatcttcccaaggatttaaggagggacatcaagcgccatctctgctggacttta
ctaacaagagtgccgatgtttgagaaaatggacgaacagttgctggatgcaatgtgttct
cgtctaaagcccgttctctacacggagaacagctttattgttcgtgagggagatcccgtc
gacgagatgctattcataatgaggggtaacatacttactatgaccacaaacggtgggaga
actggtttcttcaactcggtatatctcatggctggagacttctgtggggaagaacttctg
acatgggctctggaccccaactcttcgtccagccttcctatttcaaccagaaccgtgcag
gctgtcaaagacgttgaggctttctgtttaatgccggatgacttgaaaagtgtgacgtcc
cagtttagacgtctccacagcaagcaacttcagcacacttttaggttctattcccagcag
tggaggacatggggtgcctgttttatacaagcagcatggcgtcggcattacaggaggaag
atcgaaaagatgctgcgagaagcagaagacagactgcagaatgcattggccaaggaagga
tcagggagtttgccaagccttgctgcaaccgtttatgcatcaagattcgccaccaatatg
ctaggaaacttgcgacgtaatcatccacataacaatatttcatcaccaaaattaccacct
ctactgcttcagaagccagctgagcctgattttagtgcagaaaatccttcatag
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