KEGG   Sinorhizobium sp. CCBAU 05631: SS05631_c27660Help
Entry
SS05631_c27660    CDS       T05069                                 

Definition
(GenBank) ATP-dependent DNA ligase LigC
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sino  Sinorhizobium sp. CCBAU 05631
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:sino00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    SS05631_c27660
   03410 Base excision repair
    SS05631_c27660
   03420 Nucleotide excision repair
    SS05631_c27660
   03430 Mismatch repair
    SS05631_c27660
Enzymes [BR:sino01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SS05631_c27660
    6.5.1.6  DNA ligase (ATP or NAD+)
     SS05631_c27660
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SS05631_c27660
DNA replication proteins [BR:sino03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SS05631_c27660
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SS05631_c27660
DNA repair and recombination proteins [BR:sino03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SS05631_c27660
   NER (nucleotide excision repair)
    Other NER factors
     SS05631_c27660
   MMR (mismatch exicision repair)
    Other MMR factors
     SS05631_c27660
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
2650179..2651792
Genome map
AA seq 537 aa AA seqDB search
MKAFAELLGRLVLTPQRNAKIRLLADYFHSTPDPSRGYALAAIGGTLSFNTVKPALIRDL
LLERMDEVLFHYSYDYVGDLAETVSLAWEPQAGVVPEDIPLGEVVERLQRAGRSEVRSLV
RDMLDRLDTAGRFAFLKLVTGGLRIGVSARLAKQALADLGGRDITEIETLWHGLSPPYLP
LFLWLSGEAEMPVLTTPAVFHSVMLATPIGEGDLEGLDPADFTAEWKWDGIRVQLANIGG
VRRLYSRSGDEISGAFPEIIEAADIAGVIDGELLVGGTMRTNRATATFGDLQQRLNRKSV
NRKLLEDFPAFIRGYDILFSGERDMRPEPFHVRRQALAALIEAASPQYFDLSPLVPFSTW
EELDRLRSEPPDPVIEGIMLKRLDSPYLAGRMKGPWFKWKRAPFNIDAVLMYAQRGHGKR
SSYYSDFTFGVWTEAEGGMALVPVGKAYFGFTDAELEILDRYVRDNTVERFGPVRAVRAE
PDAGFVVEVAFEGLNRSTRHKSGVAMRFPRIARLRPDKLPREADRLETLQAMLGMKG
NT seq 1614 nt NT seq  +upstreamnt  +downstreamnt
atgaaagccttcgccgaactgctcggccgcctcgtcctgacgccgcagcgaaacgccaag
atcaggctgcttgccgactatttccacagcacccccgatccaagccgcggctatgcactc
gcggcgatcggcggcacgctttcattcaacacggtgaagcctgccttgatccgcgacctc
ttgctcgagcgtatggacgaggtgctgttccattattcctatgactatgtcggcgatctc
gccgagacggtgtcgctggcctgggaaccgcaggcgggagtcgttcccgaggacattccg
cttggcgaggtcgtcgaacggcttcagcgggcgggacgttccgaggtacgctcgctcgtc
cgcgacatgctcgaccggctcgacaccgccggccgtttcgcctttctgaagctcgtcacc
gggggtttacggatcggcgtctcggcgcggctcgccaagcaggcgctcgccgacctgggc
ggcagggacatcaccgagatcgaaaccttgtggcacgggctttcgccgccttacctgccg
ctctttctgtggctttccggcgaagcggagatgcccgttctcaccacgccggccgtcttt
cactcggtgatgctcgcgactccaatcggcgagggcgatctagaaggactggatccggcc
gacttcaccgccgaatggaaatgggacggcatccgcgtccagctcgccaatatcggcggg
gtgcggcgtctctattcccgcagcggcgacgaaatatccggcgctttcccggagatcatc
gaggccgccgacattgccggcgtgatcgacggcgagctgctggtcggcggaacgatgcgc
accaatcgcgccaccgccacgttcggggacctgcagcagcggctgaatagaaagtccgtc
aaccgcaagcttctcgaggattttccggcctttattcgcggttacgacatcctcttttcg
ggcgaacgcgacatgcggcccgaacccttccacgtccgccgccaagccctggccgccttg
atcgaagccgcttcgccacagtacttcgatctttcgccgcttgttcccttttctacctgg
gaggaactggaccggctgcgctcggagccaccggatccggtcatcgaggggatcatgctg
aagcggctcgactcgccctatctggccgggcggatgaaaggcccgtggttcaagtggaaa
cgcgcgcccttcaacatcgacgcggtgctgatgtacgcccagcgcggccacggcaagcgc
tcgagctactattcggatttcaccttcggcgtctggacggaggcagaaggcggcatggcc
ctggttcccgtcggcaaggcctatttcggctttaccgatgccgaactggagatactcgac
cgctatgtgcgcgacaacacggtcgagcgcttcggcccggtgcgcgcggtccgcgccgaa
ccggacgccggctttgtcgtcgaagtggccttcgaagggctgaaccgctcgacccgccac
aaatcgggtgtcgccatgcgtttcccgcgcatcgcccggctgagaccagacaaactgccg
cgggaggccgacaggctggagacgctgcaggcgatgctcggcatgaaaggttag

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