Sulfolobus islandicus L.S.2.15: LS215_2278
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Entry
LS215_2278 CDS
T00889
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
sis
Sulfolobus islandicus L.S.2.15
Brite
KEGG Orthology (KO) [BR:
sis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sis02048
]
LS215_2278
Enzymes [BR:
sis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
LS215_2278
Prokaryotic defense system [BR:
sis02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
LS215_2278
Subtype I-B factors
LS215_2278
Subtype I-C factors
LS215_2278
Subtype I-D factors
LS215_2278
Type II CRISPR-Cas system
Subtype II-B factors
LS215_2278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
PDDEXK_3
RE_TdeIII
DUF6724
PDDEXK_10
Motif
Other DBs
NCBI-ProteinID:
ACP36263
UniProt:
C3MJW0
LinkDB
All DBs
Position
complement(2067737..2068345)
Genome browser
AA seq
202 aa
AA seq
DB search
MITEFLLKKKLEEQLSHVKEENTIYVTDLVKCPRKVKYESEYKELAISQVYAPSAILGDI
LHLGLENLLKENFTAEAEVETQREIQVEGRVYKIKGKADAIIKNSSGESIIIEIKTSRSD
KGLPLIHHKMQLQIYLWLFNTKKGILIYITPDRIAEYEINEPLDEATIVRLAEDTITLRN
SPRFNWECKYCIFSVICPAKLT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgataactgagtttctactaaaaaagaaattagaagaacagttaagccatgtaaaggaa
gagaatactatatatgtaacagatttggtaaaatgccccagaaaagtaaaatatgagagc
gaatataaagagctcgcaatttctcaagtttatgcaccttcagctattttaggagacata
ttacatcttggccttgaaaatttattaaaggaaaactttactgcagaagctgaagttgag
actcagagagagattcaagttgaaggtagagtttacaaaattaagggaaaggctgatgca
ataatcaaaaatagtagcggtgaaagtataataattgagataaaaacttctaggagcgat
aaaggactacctttaattcaccacaagatgcaactacaaatatatttatggttatttaat
acaaaaaaggggatattaatctacataactccagataggattgcggaatatgaaataaat
gaacctttagatgaagcaacaatagtaagacttgcagaggatacaataacgttaaggaac
tcgcctagattcaattgggagtgcaaatattgtatattttccgtcatttgtccagccaaa
ctaacctaa
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