Ruegeria sp. TM1040: TM1040_1779
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Entry
TM1040_1779 CDS
T00359
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00470
D-Amino acid metabolism
sit01100
Metabolic pathways
sit01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TM1040_1779
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TM1040_1779
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
TM1040_1779
Enzymes [BR:
sit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
TM1040_1779
Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
Precursor biosynthesis
Racemase
TM1040_1779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ABF64512
RoseoBase:
TM1040_1779
UniProt:
Q1GFQ4
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All DBs
Position
1873275..1874312
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AA seq
345 aa
AA seq
DB search
MSTARLKINLDALAINWRNLDAKTNCETAAVVKANGYGLESGRVGKALAQAGARNFFVAI
AEEGIALRRALGPGPGISVFAGHMEGDAKLLRDFQLTPMLNSLDQMLRHFESLPGHPFGV
QLDSGMNRLGMEAAEWMAVRDIALDQNPVLLMSHLACSDEPGHGMNAYQLKNFIEMTEGL
NIPRSLAATGGLLLGRDYHFDLCRPGIGLYGGAPYADALPVVELEVPVIQVRDLAPGESV
GYGNTWIAQRDSKIATIAGGYADGLHRAFQRQGIMAYAGGTPCPVVGRISMDLITVDVTD
LAEVPPYLSLMNETQTVDVLANAADTIGYEVLTSLGNRYARTYSA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggcacgtttaaaaatcaatctggatgcgctggcgatcaactggcgcaatctg
gatgccaagaccaactgcgagaccgcagcggtggtcaaggccaatggctatggtctggaa
tccggccgcgtcggcaaggcgctggcacaggcaggcgcgcgcaatttctttgtcgccatc
gccgaagaaggcattgcgctcaggcgcgcgcttggacccggcccgggtatttcggtcttt
gcaggtcatatggagggcgacgcaaaactcctgcgtgacttccagctgacgccgatgctc
aactcgctggatcagatgctgcgccatttcgagagcctgccgggccacccctttggcgtc
cagctcgacagcggcatgaaccggcttggcatggaggccgccgaatggatggccgtgcgc
gacatcgccctcgatcaaaaccccgtcctcttgatgtcgcatctggcctgctcggacgag
ccgggccacggcatgaacgcatatcagctcaagaatttcatcgagatgaccgaggggctc
aatatcccccgctcgctcgcggccactggcggccttctgctggggcgcgactaccacttt
gatctctgccgtcccggcatcgggctttatgggggcgcaccctacgccgatgcgctgccc
gtggtcgagcttgaggtgccggtgattcaggtgcgcgacctcgccccgggcgagagcgtc
ggctacggcaacacctggattgcgcagcgcgacagcaagatcgccaccattgccggcggc
tatgccgacgggctgcaccgggcgttccagcgacaggggatcatggcttatgcgggcggc
accccctgccccgtggtgggtcggatctcgatggatctcatcaccgtcgatgtcaccgac
ctggccgaagtgccgccctacctgagcctcatgaatgagacgcagaccgtggatgtgctg
gcaaacgccgctgataccatcggctatgaggtcctgacctcgctcggcaaccgctatgcg
aggacctacagcgcatga
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