Ruegeria sp. TM1040: TM1040_2678
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Entry
TM1040_2678 CDS
T00359
Name
(GenBank) cyclic nucleotide-binding protein
Organism
sit
Ruegeria sp. TM1040
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
cNMP_binding
ABC_tran
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
ABF65410
RoseoBase:
TM1040_2678
UniProt:
Q1GD56
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All DBs
Position
complement(2814095..2817148)
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AA seq
1017 aa
AA seq
DB search
MEPSLFSFIWRYSKRQQFGLLLLTLMTFPFLYATLELPKRIINDAIGAPSAWIDLWGWRL
SAQQYLLVLCFAFLGAVLASGMMKMRLNTLKGILSERLLRRLRYQMIARMMRFPTNHFRT
TSQGEMVSLITSESEPMGGLMGDAVAQPVFQAGQMLTIVSFLFIQSVWFGLASVALIPLQ
AWLIPMLQRQINLLNKDRIAEVRALSAEIGETAAGLQDLRSNGGWRYRLAQVSDRLGRLF
EIRRRIYMKKFFMKFLNNLIGHLTPFFFYSVGGVLALRGEITVGALVAALAAYKDLSAPW
KELLTYYNQVQDMSLRWQIMTEKFSPPGMIDPALFEGVPQKVPHLRGDIELRDVTVRDAE
GKPVLDGLTLTIPAGAQVAIQSSSAAERQALAQLLTREVLPTRGEVIVAGHPLAELHQGV
IASRIGYAFNAPYLFDGTLGDNVLMPLRNQPRATAAERQLLQRAEALKAGNSGDPVNADW
VNPDLAGLRSEHDLRDWWFQLVEAMGIDGQLFHRTLHARLQDRHRALEAQITALRPRIAE
RLEAQGLRDVVYRFLPDLYNPALPLAENMMFAFPVEPVPPTLFTDPDGPFQRVLRAEGLE
SQTRDISLALIDTLQRTFGRGQTSHPLFRRLNLDEELYARIVKAADRYREGRVLDGTDRA
LLCTLPFLLTEEQLGAGLPRDYKLRILGIRNRRGDLLLADCGGVYRRLRAGEYARKLTVL
ENALFGRISIHAGGKAQAVEDVVADVMADNDLKARLALMIYDLPTGLGGALLEPVFRERA
AFTRAAIKRPDILILDHVLASHDSDNRLKTRNRLQALLPKTTMIHLEDHFEHPSRYDLHL
TLRDGRIDGQSGVATVLLDAPEEAEDDFDRKLSEIGSADLFARLDARHRRLLAFSASWVR
VPTGAAVFRAGEAGDAVYLCLSGQAELQFPEDGSALDMIAPGRLIGDLAVITAAPRQLDL
FAVEDCVFLRIGAEEFRTVIESDITVALHLLQTVSGHLSSAAVALQDARSAQGSAEP
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
gtggagccgagcctattttcctttatctggcgctattcgaaacggcagcagtttggcctc
ctgctgctgaccctgatgacgtttccctttctttacgcgaccttggaactgcccaagcgg
atcatcaacgatgccatcggcgcgccgagcgcctggatcgacctctggggctggcggctg
agcgcgcagcagtatctcctggtgctctgctttgcgtttctgggtgctgtgctggcgtcg
ggaatgatgaagatgcggctcaacacgctcaagggcatcctttccgagcgtctcctgcgc
cgcctgcgctatcagatgatcgcgcggatgatgcgcttcccgaccaaccatttccgcacc
accagccagggtgagatggtctcgctcatcacctccgaatcagaaccgatgggcggcctg
atgggcgatgccgtggcgcagccggtgtttcaggcggggcagatgctcacgatcgtctcg
ttcctgttcatccagagcgtctggttcgggctcgcgtcggtggcgctcattccgctgcag
gcctggcttattccgatgctgcagcgccagatcaacctgttgaacaaggaccgcatcgcc
gaggtgcgcgcgctgtctgccgagatcggcgaaacggccgccgggctgcaggatttgcgc
agcaatggtggctggcgctaccggctggcgcaggtctccgatcgcctcgggcggctcttt
gaaatccgccgccggatctacatgaaaaagttcttcatgaagttcctcaacaacctgatc
ggccatctgaccccgtttttcttttattcggtggggggcgtgctggcgctgcgcggtgag
atcaccgtgggggccttggtggccgcgcttgcggcctacaaggacctctcggcgccgtgg
aaagaactgctgacctattacaaccaggtgcaggatatgtccctgcgctggcagatcatg
accgagaaattctcgcctcccggcatgatcgacccggcgctttttgagggggtaccgcaa
aaggtgccacatctgcgcggtgacatcgagctgcgcgacgtgaccgtgcgcgatgcagag
ggcaagccggtgctcgatgggctgacgctcaccattcccgcaggggcccaggtcgcgatc
caaagcagttctgccgccgaacgtcaggccctggcgcaacttttgacccgcgaggtgctg
cccacgcgcggcgaggtgatcgtggcgggccatccgcttgcggaactgcatcagggcgtc
attgcgagccgcatcggctatgcgttcaacgcgccctatctctttgacggcacgcttggc
gataatgtcttgatgccgctgcgcaaccagcctcgcgccaccgcggcagaacggcagctc
ttgcaacgggccgaggcgctcaaggcgggcaatagtggcgatccggtgaatgcggattgg
gtcaaccccgatcttgccgggctgcgttcggaacatgatctgcgggactggtggttccaa
ctcgtcgaggcgatgggcatcgacggccagctctttcaccgcacgctgcatgcgcgtctg
caggatcgccaccgcgcgcttgaggcgcagatcaccgcgctgcgcccacgcattgccgaa
cgactggaggcgcagggcctgcgcgacgtggtctatcgttttctgcccgatctctataat
ccagccctgcccctggcagaaaacatgatgttcgccttcccggtggagccagtgccccca
acgctctttaccgatcctgatggccccttccagcgggtcttgcgcgccgaagggctggag
tcccagacccgcgacatcagcctcgcgctgatcgacacgttgcaacgcacctttgggcgc
ggccagacctcgcacccgttgtttcgccgcctgaacctcgacgaagagctctatgcgcgg
atcgtcaaagcagccgaccgctatcgcgagggccgggtgctggacggcaccgaccgggcg
ctgttgtgtaccctgccgttcctgctcaccgaagagcagctcggggcgggcctgccgcgc
gattacaagctgcgcatccttggaatccgcaaccgtcgcggcgatctgttgctcgccgat
tgcggcggtgtctaccggcgtctgcgggccggggaatatgcccgcaagctcacggtgctg
gagaacgcgctctttggccggatctcgatccatgcgggcggcaaggctcaagcggtcgag
gacgttgtggccgatgtgatggccgataacgacctgaaagcacggttggcgctgatgatc
tacgatctgcccaccgggcttggcggtgcgctgctggagccggtgttccgcgaacgcgcc
gccttcacccgcgcggcgatcaagcggccggatatcttgatcctcgatcatgtgctggcg
agccacgactcggacaaccggctgaaaacccgcaaccggctgcaggctctcttgcccaag
accaccatgatccacctcgaggatcattttgaacatccctcgcgctatgatcttcacctc
acgctccgggacgggcggatcgacgggcaaagcggcgtggcgaccgtgcttctggacgcg
cccgaagaggcagaggatgattttgaccgcaagctgtccgagatcgggtcggcggatctc
tttgcccgtctggatgcccgccatcgccgtcttctggcgttttcggcctcttgggtgcgc
gtgccgaccggcgcggcggtgtttcgcgcgggcgaagcgggggatgcggtctatctgtgt
ctttcggggcaggcggagctgcaattccccgaggatggcagcgcgctcgatatgatcgcg
cccggacggctgatcggggatctggctgtgattaccgccgcgccgcgccagctcgatctg
tttgcggtggaggattgcgtctttctgcgtatcggggccgaggagttccgcaccgtaatc
gagagcgacatcaccgtggcgctgcacctgttgcagaccgtctctggccatctctcgagc
gcggcggtcgcgctgcaggacgcccgctcagctcagggcagcgccgagccctga
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