Ruegeria sp. TM1040: TM1040_2772
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Entry
TM1040_2772 CDS
T00359
Name
(GenBank) Penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00550
Peptidoglycan biosynthesis
sit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TM1040_2772
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sit01003
]
TM1040_2772
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
TM1040_2772
Enzymes [BR:
sit01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
TM1040_2772
Glycosyltransferases [BR:
sit01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
TM1040_2772
Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
TM1040_2772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
ABF65504
RoseoBase:
TM1040_2772
UniProt:
Q1GCW2
LinkDB
All DBs
Position
complement(2923147..2925219)
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AA seq
690 aa
AA seq
DB search
MAGPHRRWRSPLRLPLLGLLIAAVIAGKALDQWVEDTRLPQTLAETSVEVRDRHGRLLRA
FPVEDGIWRMAVRSEEVDPTYLRMLRAYEDKRFDTHFGVDPVAMLRAFGQAVWNGRTVSG
GSTLTMQVARLLEDGPTGRWSGKLRQIRVALALERKLSKTEILNLYLIHAPFGGNLEGVR
AASLSWFGKEPHRLTAAEAALLVALPQSPETRRPDRSVSAAREARRRVLNRSQDAGVLTT
EVAHLAAVAPLPDRRRAFPLLAPHLSDQLRATAPAQARFDTTLDAMLQARLQAVLSRRVK
VSGARLSAAMIVADHQSGEILVRIGAPDYTDTARRSYVDMARAVRSPGSTLKPLVYGLAF
DDGLAHPDTLIRDAPVSFGGYAPQNFDGAFRGDVRVRDALQMSLNTPVVTLTEALGPSRL
MAAMRQVGMRPQLPSGKPGLAVSLGGVGVSLHDLVQMYAVVAAGGTAPRLTSETGAAREK
TPRVMSPVAAWYLGDILRDAPAPAGARGGMLPYKTGTSYGHRDAWAVGWDGRHVIGVWLG
RADGTPVPGVFGAELAAPVLFEAFAVLKPEIDPLSPPPSNALVLETAELPAPLQRFRARS
ETFSEAGAGAPEVLFPPTHARLSLVEGRMALKLRGGRLPFTVLANGVPVAQGLRSRDLDL
PSPGPGHATLVVIDADGQSARVTVEIEETG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggccctcacaggcgctggcgctcaccgctcaggcttccacttctgggcctgctg
attgcagcggtcattgcgggaaaagcgctggatcaatgggttgaggacacgcgcctacca
cagaccttggccgaaacttcggttgaagtgcgggaccgccatggtcggctcctgcgcgct
tttccggtagaagatggcatctggcgcatggcggtccgctctgaagaagtggaccccacg
tatctgcgcatgttgcgcgcctatgaagacaaacggttcgacacccacttcggagtagat
ccggtcgcgatgctgcgcgcctttgggcaggccgtgtggaatggacggaccgtctcgggg
ggctccactctcacgatgcaggtcgcacggttgctcgaggatgggccgaccgggcgctgg
tctggaaagctgcgccagatccgtgtcgcgctggctctggaacgcaagctctccaagacc
gagatcctcaatctctacctcattcacgcaccatttggtgggaatctcgaaggggtgcgc
gccgcaagtctttcctggtttggcaaggagccacatcgcttgaccgctgcggaagctgcg
cttctggtggcactgccgcaatcaccagagacacgccgtcctgaccgatcggtaagtgcg
gcgcgagaggcacggagacgcgtgctcaatcgcagccaagacgcaggcgtactgacgacg
gaagtggcacatctcgccgccgttgcgccgctacctgacaggcggcgggcgttccccctg
ctggcacctcatctgagcgatcaactccgcgcgacagccccggcacaggcgcggtttgac
accacattggatgcgatgcttcaggcgcggcttcaggcggtgctatcgcgcagggtcaag
gtctctggtgcacggctgagcgcagcgatgattgttgccgatcaccaaagcggggagata
ttggtgcggatcggggcgcccgattacacggataccgcgcggcggagttacgtcgatatg
gcgcgcgcggtgcgttcgccgggctctactctgaaaccgctggtctacggtctcgccttt
gacgatgggcttgcgcatcctgatacgctgatccgcgatgcgcccgtgtcctttggtggc
tacgcacctcagaactttgatggtgcatttcgcggagatgtgcgggtgcgcgacgcgttg
cagatgtctttgaacaccccggtcgtcaccttgaccgaggcgcttggaccgtcgcggctg
atggccgcaatgcggcaggtcggcatgcgaccccaactccctagcggaaagccggggctg
gcggtcagcctcggcggtgttggtgtgagtcttcatgatctggtgcaaatgtatgcggtc
gttgctgccggcggaacggcaccgaggcttacctccgagaccggagctgcgcgggaaaag
accccaagggtaatgtcgccggttgcagcttggtatcttggggacatcctgcgcgatgct
ccggcgcccgccggggcgcgcggtggtatgttgccctacaagacaggcacgtcttacggg
caccgagatgcttgggctgtgggctgggacgggcggcatgtgatcggagtctggctcgga
cgagcggacggcacgccggtgccgggtgtctttggcgcggagctggcggcaccggtgctg
ttcgaagcctttgccgttttaaaaccggagattgatcctctgtccccgcccccttcgaac
gcactggtgttggagaccgcagagctcccggcccctctgcaacggtttcgcgcccggtca
gagactttttcagaggccggcgccggggcgccagaggtgcttttcccacccacccatgcc
cggctttcgttggtggaggggcggatggcgttgaaattgcggggaggtcggttgcccttt
accgtgctggccaatggcgtgccggtggcccaaggcctgaggtcacgcgacctcgacctt
ccgagccccgggccgggccatgcaacgcttgtggtgatcgatgcagacgggcaatctgca
cgggtgaccgttgaaatcgaggagaccggctaa
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