Ruegeria sp. TM1040: TM1040_3511
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Entry
TM1040_3511 CDS
T00359
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00020
Citrate cycle (TCA cycle)
sit00785
Lipoic acid metabolism
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
sit01210
2-Oxocarboxylic acid metabolism
Module
sit_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sit_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TM1040_3511
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TM1040_3511
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
TM1040_3511
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ABF62483
RoseoBase:
TM1040_3511
UniProt:
Q1GLI3
LinkDB
All DBs
Position
mega:complement(545904..548855)
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AA seq
983 aa
AA seq
DB search
MTEQSPNDIFHASSFMQGHNAEYLEQLYAQYANDPNAVDAAWAEFFRAMGDADGDVKAEA
AGPSWARNDWPPAPADDLTAALTGEWPAPVEAKAAGKKIADKAKEKGVEVSDEAIQRAVL
DSIRALMLIRAYRIRGHLAADLDPLGMRAATPHPELDPKSYGFDGADMDRPIFIDNVLGL
EVATMRQIVDIVKRTYCGTFALQYMHISDPEQSAWLKERIEGYDKEITFTREGRKAILNK
MVEAEGFEKFLHVKYMGTKRFGLDGGESLIPAMEQIIKRGGNLGVKDIVIGMPHRGRLSV
LANVMQKPYRAIFNEFQGGSFKPEDVDGSGDVKYHLGASSDREFDGNSVHLSLTANPSHL
EAVNPVVLGKVRAKQDQLGDKDRTAVLPILLHGDAAFAGQGVVAECFALSGLRGHRTGGT
MHIVVNNQIGFTTAPHFSRSSPYPTDNALVVEAPIFHVNGDDPEAVVHAAKVATEFRQKF
HKDVVIDIFCYRRFGHNEGDEPMFTNPLMYKKIKGHKTTLSLYTERLVKDGLIPEGEIED
MKAAFQAHLNEEFEIGKTYKPNKADWLDGRWSHLDSKDEDYQRGETAIKPETLEEVGKGL
TTLPEGYPVHKTIGRFLDARKKMFESGEGFDWATGEALAFGSLLTEGYPVRLAGQDSTRG
TFSQRHSGIVNQDTEERYYPLNNIRAGQANYEVIDSALSEYAVLGFEYGYSLAEPNALTL
WEAQFGDFANGAQIMFDQFVSSGESKWLRMSGLVCLLPHGFEGQGPEHSSARLERFLQMC
GQDNWIVANCTTPANYFHILRRQLHRTFRKPLILVTPKSLLRHKLAVSKAHEFTTGSSFH
RVLWDDAETGLSETKLVEDKKIKRVVLCSGKVYYDLLEERDARGIDDVYIMRIEQYYPFP
AISLVKELERFKGAEMVWCQEEPKNQGAWTFIEPNIEWVLTRIKAKNTRPIYVGRATSAS
PATGLASEHKAQQAALVNEALSI
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagagccccaacgacatcttccatgcgtcctcctttatgcaggggcacaac
gcggagtatctggagcagctttatgcccagtacgccaatgatcccaacgcagtagacgcc
gcgtgggcggaattctttcgcgccatgggcgacgctgatggcgacgtgaaggccgaagct
gcaggccccagctgggcgcgcaacgactggccgcccgcccctgccgacgacctcacggcg
gctctgaccggcgagtggcctgcccccgtcgaggccaaggcggccggcaagaagattgcc
gacaaggccaaggaaaagggtgtcgaagtctctgacgaggcgatccagcgcgcggtgctc
gactcgatccgcgctctgatgctgatccgggcctaccggatccggggccatctggcggct
gatctcgacccgctgggcatgcgcgccgccacgccgcacccggagcttgatccgaaatcc
tacggttttgacggcgccgacatggaccgcccgatcttcatcgacaacgtgctggggctg
gaagtggccaccatgcgtcagatcgtggatatcgtgaagcggacctattgcggcaccttt
gcgcttcagtacatgcatatctcggaccccgagcaatctgcctggctgaaagagcgcatc
gagggctatgacaaggaaatcaccttcacccgcgaaggccgcaaggcgatcctcaacaag
atggttgaggccgaagggttcgaaaagttcctgcatgtaaaatacatgggcaccaagcgc
tttggtctggatggtggtgagagcctcatcccggcgatggagcagatcatcaagcgcggc
ggcaacctcggtgtcaaagacatcgtgatcggcatgccgcaccgcggccgcctgtcggtt
ctggccaatgtgatgcaaaagccctatcgcgcgatcttcaacgagttccagggcggatcg
ttcaagcccgaagacgtggatggctcgggcgatgtgaaatatcacctcggcgcctcttcg
gaccgtgagtttgatggcaacagcgtccacctgtcgctgaccgcaaacccctcgcacctt
gaggcggtgaacccggttgtgctgggcaaggtccgtgccaagcaggaccagctgggtgac
aaggaccgcacggcggttctgccgatcctcctgcacggcgacgcggcttttgcgggtcag
ggtgttgtggcggaatgttttgcgctctccggtctgcgcggtcaccgcaccggcggcacc
atgcatatcgttgtgaacaaccagatcgggttcaccaccgcaccgcatttctcgcgctcc
tcgccctatcccaccgacaacgcgctggtggttgaggcaccgatcttccacgtcaacggt
gacgacccggaggccgtggtccacgcagccaaggtcgcaaccgaattccgccagaagttc
cacaaggacgtcgtcatcgacatcttctgctatcgccggtttggtcacaacgaaggcgac
gagccgatgttcaccaacccgttgatgtacaagaagatcaagggtcacaagacgaccctg
agcctctacacggaacgtctggtcaaggacggtctgatccccgagggcgagatcgaagac
atgaaggcggcgttccaggcgcacctcaacgaagagttcgagatcggcaagacctacaag
cccaacaaggccgactggctggatgggcgctggtcgcatctcgacagcaaggacgaggat
tatcagcgtggcgaaaccgccatcaagcccgagacgctggaggaggtcggcaagggtctg
accactctgcccgagggctatccggtgcataagaccatcggtcgcttccttgatgcgcgc
aaaaagatgttcgagagcggcgaaggctttgactgggccaccggcgaggcgctggcgttc
ggctcgcttctgaccgaggggtatccggtgcgtctggcggggcaggactccacccgcggg
accttctcgcagcgccattcgggcatcgtcaatcaggacaccgaagagcgctactacccg
ctcaacaatatccgcgcgggtcaggccaactatgaggtcatcgactcggcactgtcggaa
tacgcggttctgggctttgaatatggctactcgctggcagagcccaacgcgctgaccctc
tgggaagcgcagtttggcgactttgccaatggcgcgcagatcatgttcgaccagttcgta
tcctcgggcgagagcaagtggctgcggatgtccggtcttgtgtgcctcttgccgcacggg
tttgagggccagggtccagagcactcttcggcgcgtctggagcgtttcctgcagatgtgc
ggtcaggataactggatcgtggcgaactgcacgacgccggcgaactacttccacatcctg
cgccgtcagctgcaccggaccttccgcaagccgctcattctggtgacgccgaagtcgctt
ctgcgccacaagcttgccgtgtccaaggcacatgagttcaccaccggctcgtccttccac
cgggttctgtgggatgatgcggaaacgggtctctctgagaccaagctcgttgaggacaag
aagatcaagcgcgtggtgctgtgttcgggcaaggtctactacgaccttcttgaagagcgc
gacgcccgcggcatcgacgatgtctatatcatgcggatcgagcagtattaccccttcccg
gcgatcagcctcgtgaaggaactggagcggttcaagggcgcagaaatggtctggtgccag
gaagagcccaagaaccagggtgcctggacctttatcgagcccaacattgagtgggtcctg
acccgcatcaaggcaaagaacacccgtccgatctatgtcgggcgcgccacctcggcctcg
cctgcaaccggcctggccagcgaacacaaagcccaacaagctgcgctcgtgaacgaagcg
ctgagcatctga
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