Setaria italica (foxtail millet): 101758923
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Entry
101758923 CDS
T02818
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101758923
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101758923
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
Suf
Motif
Other DBs
NCBI-GeneID:
101758923
NCBI-ProteinID:
XP_004985250
UniProt:
K4A635
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Position
IX:53266111..53274254
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AA seq
771 aa
AA seq
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MEQHQTVAAGVDSGSAEPGAAAFDLTTANPEANAYGHNPPAVTGGSAVTPDGGAQAADGS
AYPAEHAALNGTAGEMANYQSTENGAAVTNEMGEPVPEPSYEEAAVSAEEARLWSVVTAN
SLDFNAWTTLIDETEKNAESNILKIRKVYDAFLAEFPLCFGYWKKYADHEGRLDGANKVI
EVYERAVLAVTYSVDIWYNYCQFAISTYDDPEIIRRLFERGLAYVGTDYRSNILWDEYVK
YEESLQAWSHLAVIYTRILEHPIQQLDRYFNCLKELASTRDLSEILTAEEASVYGVASEN
SAQVLDGETHPDDPDKSSKPEAENLAKYVSMREEMYKKAKEYESKIIGFELAIRRPYFHV
KPLDNPELENWHNYLDFIEKEEDINKVIKLYERCVIACASYSEFWIRYVQCMEDKGSLEL
ANNALARATHVFVKKQPEMHLFSARFKELNGDVSGARAEYEHLYSVLCPGFLEAIVKHSN
MEHRLGDDASACSVYDKAISTEKEKEQSQLLPTLLIQYSRFLFLAIQDLERARDTLTELH
EQLNITKPVLEAVIHLESIFPCVKRIEFLDSLVERFITHESSQGEGSSLGDKEEISSIFL
EFLDLFGDAKSIKKALTRHTALFSCKRSILPSKKRKADDAIMSDRDKLAKIGGTQPVMGT
DPNAPNPPVWPATSEASGQQWGAGYAPQAAYPAYGTYDYSHQMPQPAAQAAYGAYPQAYP
AQGYTQQSYAQPAAMAAAPVPAAAPAPAPTAAYPQQPAAAAPQPYYGTTYY
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaccagaccgttgctgccggtgtcgattccggtagcgcggagcctggtgcc
gcagctttcgatttgacgaccgccaatcctgaggcgaacgcgtacggtcataatccaccg
gctgtcaccggtgggagcgccgtgacccctgacggtggagcccaggcagctgatggctct
gcctacccggccgagcacgcggcgttgaatgggacggctggcgagatggctaattaccaa
tctacagagaacggcgccgcagtcaccaacgagatgggcgagccggttccagagccatca
tacgaagaagctgcggtttcagcagaagaggctaggttgtggagtgttgttactgcaaat
tccttagatttcaatgcttggaccacacttattgatgaaacagagaagaatgctgagagc
aatattttgaagatacggaaagtgtatgatgcatttcttgcggagttccctctttgcttt
ggttattggaagaaatatgcagatcatgaaggtagacttgatggtgccaacaaagttata
gaggtgtatgaacgagcggttcttgcagttacttattcagtggacatttggtataactac
tgtcagttcgcaatttcaacatatgatgacccagagatcatcagaagactgtttgaaaga
ggtttggcgtacgttggaacagattatcgatccaatattttgtgggatgagtatgttaag
tatgaagaatcactgcaggcatggagtcatctagctgtgatatatacaagaatattagag
catcccatacagcagcttgatcggtactttaattgcctcaaggaattggcttcaacacgg
gatctttcggagatactgactgcggaggaagcttctgtgtatggtgttgcttctgagaat
agtgctcaggttcttgatggtgagacacatcctgatgatcctgataaatccagcaaacct
gaagcagagaaccttgcaaagtatgtctccatgagagaagagatgtacaagaaggccaaa
gagtatgaatctaagattattggttttgagctagctattagaagaccatattttcacgtc
aagcctcttgacaatccagagcttgaaaattggcataactaccttgattttatcgagaag
gaagaagacatcaataaggttatcaaattgtacgaaagatgtgttattgcatgtgctagt
tattcagaattctggatccgctatgtgcaatgtatggaggataaaggtagtctagaacta
gcaaacaatgccctggctcgtgccactcatgtgtttgtcaagaagcagccagagatgcat
ctgtttagtgcacgctttaaggagcttaatggagatgtttctggagcacgtgcagaatat
gagcatctttactcagtactatgtcctggctttctagaggccattgtgaagcattccaat
atggagcaccgactgggtgatgatgcatcagcttgttcagtttatgacaaggccatttca
actgaaaaggaaaaggaacagagccagctcttgccaacgttgcttattcagtactcacgc
ttcttatttttggccatccaagatttggaaagggcaagggataccttaactgaattgcat
gagcaattgaacataacaaaaccagttcttgaggctgtcattcatctagagtctatcttt
ccatgtgtaaagcgtattgaatttttagattcacttgtggagaggtttattacacatgaa
tcatctcaaggagaggggtcaagtctaggcgacaaagaagaaatatcttccatatttttg
gagtttttggatctctttggggatgcaaagtcaatcaagaaggctttaactcggcacacg
gctctcttttcatgtaagagaagcattctaccatcaaagaaacggaaagcagatgatgct
attatgtcagacagggacaagttggctaaaattggtggtactcagccagttatggggact
gatccaaatgctcccaatcctccagtttggcccgcgacttctgaagcatcagggcaacaa
tggggagctggttatgcacctcaggctgcataccctgcatatggaacttatgactacagc
catcaaatgcctcagcctgctgctcaagctgcttatggtgcttaccctcaagcataccct
gctcagggctacacacaacaaagctacgcacaacctgcagcaatggcagcagcaccagtg
cccgcagcggcaccagcaccggcaccaacagcagcctaccctcagcaacctgcggcagca
gctcctcaaccctactatggcacaacctactactga
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