KEGG   Setaria italica (foxtail millet): 101763000
Entry
101763000         CDS       T02818                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101763000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sita03019]
    101763000
   03041 Spliceosome [BR:sita03041]
    101763000
Messenger RNA biogenesis [BR:sita03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101763000
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101763000
Spliceosome [BR:sita03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101763000
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 101763000
NCBI-ProteinID: XP_004969158
UniProt: K3XHP6
LinkDB
Position
V:complement(28502613..28506867)
AA seq 450 aa
MDPYSKKRKPDENGAATASPAGGAAALGLTRDDVLRLLEPLSRDQLADIAAAAALVSAHA
LDAVRAAADRDPALRKLFVRGLGWETTSDSLRSIFSAYGDLEEAVVITDKNTGRSKGYGF
VTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGAAGGPSGGAAGSGGAPVADVSLRKIFV
GNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDSVKV
IDGHQLVCKLAIEGKKGKQGQSQQSGPGNQQQQQQMLQGGPQDMQGGLGLGPGPQMGAQY
GGPGSGLSSFGAFGGVGGGFGGPNPYGNMPSSMGGGGAGGLGSMGGQVPTGLGGAGPGAF
GPGGLGGGSFGGSSQFGAGGMGAYGGLGMGGGSMYRMQQGGGGLPAGAFGEGGNYPLPGS
GFRGQDPQGGMSPGPGGRAPPMYPNVPPYF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggatccctactccaagaagcgcaagcccgacgagaacggcgccgccaccgcctccccc
gccggcggggccgccgcgctgggcctcacccgcgacgacgtcctccgcctcctcgagccg
ctctcccgggaccagctcgccgacatcgcggctgccgccgcgctcgtctcggcgcacgcg
ctcgacgccgtgcgcgccgccgccgaccgggacccggccctccgcaagctcttcgtgcgg
gggctcggatgggagaccacctccgactcgctccgctccatattctccgcctacggcgac
ctcgaggaggccgtggtcatcaccgacaagaatacggggcggtccaagggctacggcttc
gtcaccttccgccacgccgactctgccgtcctcgcgcttaaggagccctccaagaagatc
gacggccgcatgaccgtcacgcagctcgctgccgctggtgcggccggcgggccgtctggt
ggggccgcgggcagcggtggtgctcccgtggcggatgtctccctccgaaagatctttgtt
ggcaacgtccctgccgacatgtcgtctgagcgcctccttgcgcactttgcctcgtatggt
gagatcgaggaggggccgctgggttttgacaagcagactggcaagttccgtggctttgcc
ctctttgtgtacaagacgcctgagggtgctcaggcctcgttagtggactcggtgaaggta
attgacggccaccagcttgtatgcaagctcgcgatagaggggaagaagggcaagcagggg
caatcgcagcaatccgggcctggcaaccagcaacagcagcagcagatgttgcagggtggt
ccacaggacatgcagggagggcttgggcttgggcctggcccacagatgggagcacagtat
ggtggccccgggagtggactgtcatcgtttggggcatttggtggtgttggcggtgggttt
gggggtccaaacccttatggaaacatgccatcttctatgggtggaggaggcgcaggtggt
ttaggctctatgggaggccaggtgcctaccggtttgggtggtgctgggcctggcgcattt
gggcctggtggattgggtggtggctcgtttggtggatcatctcagtttggtgctggtggg
atgggggcttatggcggccttggaatgggtggaggttccatgtaccgcatgcaacaggga
ggaggtgggctgcctgcaggtgcctttggtgaaggagggaactacccccttccagggtct
ggtttccgtggccaggaccctcaaggtgggatgtcacctgggccaggtggcagggctcct
cctatgtatcccaatgtgccgccttacttctaa

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