Setaria italica (foxtail millet): 101763779
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Entry
101763779 CDS
T02818
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101763779
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sita01009
]
101763779
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101763779
03036 Chromosome and associated proteins [BR:
sita03036
]
101763779
Protein phosphatases and associated proteins [BR:
sita01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101763779
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101763779
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101763779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
P2R3B_EF-hand
DUF5539
Motif
Other DBs
NCBI-GeneID:
101763779
NCBI-ProteinID:
XP_004982873
UniProt:
K4A857
LinkDB
All DBs
Position
IX:complement(16677987..16686934)
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AA seq
541 aa
AA seq
DB search
MEVEPARRDAAALDPELLQLPELAPGALRENSIIADALYSQWLVLPETAKLVKSLIEDAK
AGATLNVAGTSASTNAASSSSLPSMFPAGSAPPLSPRSTSGSPRVMRRGSGAGPSSLGSP
LKLVSEPVREVIPQFYFKHGRPPPKDLKEQCLSRIDHLFFGGEGLQIQEFRSVTKDICKL
PSFFSSVLFKKIDVACTGTVSRDAFVEYWINDNKITMDMASQIFEILRKPGYNYLTQDDF
KPVLKELLATHPGLEFLQGTPEFQERYAETVIYRIFYSINRSGNGHLTLRELKRGNLIAA
LQQLDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVDR
IFTQIPRKFTSMTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTSNEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENESYFTLRDLKRCKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagcctgcgaggagggacgcggcggcgctggacccggagctgctgcagctc
ccggagcttgcgccgggcgcgctccgtgagaattccatcatagctgatgcgctctactcg
cagtggctcgtgctacccgagacggccaagctggtaaagtctttgattgaggatgcaaaa
gctggtgctacgcttaatgttgctggaacctctgctagcacaaatgctgcttcaagtagt
tctctaccatcaatgtttcctgctggtagtgctcctccactttctcctaggagcacttct
ggttctccccgtgttatgagacgaggatctggtgctggaccatcgtccttgggttctcca
ttaaaattagttagtgaaccagtgagagaagttatacctcagttttacttcaagcacggg
cgtcctcctccgaaagacttgaaggagcagtgcttatctagaatagatcacctgtttttt
ggtggggaggggcttcagattcaagaattcagatcggtcacaaaggacatatgcaaactc
ccttcattcttctccagtgttcttttcaagaaaattgatgttgcgtgcactggaaccgtc
tcaagggatgcatttgttgaatactggatcaatgataataagattacaatggatatggct
agccaaatatttgaaatattaagaaagccaggttacaactatctcactcaggatgacttc
aagcctgtcctaaaagaactcctggcaactcaccctggcttagagttcttacaagggacc
ccagagtttcaggagagatatgcggagactgtaatatacagaatcttttactccatcaat
agatctggaaatggccatctgactctgagagagctcaaacgtggaaatttaattgccgcc
cttcagcaattagatgaggaagaagatatcaacaaagtgttgagatacttctcatatgag
cacttctatgtgatctactgcaaattttgggagctggatacagatcatgatttcttgatt
gataaggaaaaccttatcagatatggaaatcattcattgacctatagaatagttgataga
atttttacacagatcccaaggaaattcacaagcatgacagaaggaaagatgggttatgaa
gactttgtttactttatattatcagaggaagacaaatcatctgagcctagccttgaatac
tggtttaagtgcattgatcttgatggtaatggtattttaacttccaatgaaatgcaattt
ttctatgaggagcaattgcaccgtatggagtgcatggcacaggagcctgtgctttttgag
gacatattatgccagatgattgacatgattggaccagagaatgagagctattttacacta
cgggacttaaaacggtgtaaactctcaggaaatatattcaatattcttttcaatctgaac
aagttcatggcatttgaaactcgtgatccgttcctcattcgccaggaacgtgaaaaccca
actctaaccgagtgggatcggttcgcccatagagagtatattaggttgtccatggaagaa
gatggtgaagatgcttcaaatggaagtggggatgtgtgggatgaatcacttgaagctcca
ttctga
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