Setaria italica (foxtail millet): 101765405
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Entry
101765405 CDS
T02818
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101765405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101765405
03016 Transfer RNA biogenesis [BR:
sita03016
]
101765405
03012 Translation factors [BR:
sita03012
]
101765405
04131 Membrane trafficking [BR:
sita04131
]
101765405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101765405
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101765405
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
101765405
Translation factors [BR:
sita03012
]
Eukaryotic type
Elongation factors
101765405
Membrane trafficking [BR:
sita04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
101765405
Exosome [BR:
sita04147
]
Exosomal proteins
Proteins found in most exosomes
101765405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
101765405
NCBI-ProteinID:
XP_004984834
UniProt:
K4A9X9
LinkDB
All DBs
Position
IX:complement(49355733..49358778)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMLVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagtctcacattaacatcgtggtcattggccatgtcgactctggcaaa
tcgaccaccactggccacctgatctacaagcttggaggtattgacaagcgtgtgatcgag
aggttcgagaaggaggccgcagaaatgaacaagaggtccttcaagtatgcgtgggtgctt
gacaagctcaaggctgagcgtgagagaggtatcaccatcgacattgccctgtggaaattc
gagaccaccaagtactactgcacggtcattgatgcccccggtcaccgtgacttcatcaag
aacatgattaccggtacctcccaggctgactgtgctgtcctcatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctgcttgct
ttcactcttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccacaccc
aagtactcgaaggcccgctatgatgagattgtgaaggaagtctcttcgtacctcaagaag
gttggatacaaccctgacaagattcactttgttcccatctctggtttcgagggcgacaac
atgattgagaggtccaccaacctggactggtacaagggcccaacactgcttgaggctctt
gacttgatcaatgagccaaagaggccttcggacaagcccctgcgtctcccccttcaggat
gtgtacaagattggtggtattggaactgtgcctgttggtcgtgtagagactggtgtcatc
aagcctggtatgcttgtcacctttggtcccagcggcctgaccactgaggtgaagtctgtt
gagatgcaccatgaggcgctccaggaggcccttcccggtgacaatgttggcttcaacgtg
aagaacgttgctgtgaaggatctcaagcgtgggtacgtggcctccaactccaaggatgac
cctgccaaggaggctgccaacttcacctcccaggtcatcatcatgaaccaccctggccag
atcggcaatggctacgccccagtgctggactgccacacctcacacattgctgtcaagttt
gccgagcttgttaccaagattgacagacgatctggcaaggagctcgagaaggagcccaag
ttcctgaagaacggtgatgctggtatggtgaagatggttcccaccaagcccatggttgtg
gagacattctctgagtaccctcctcttggtcgctttgctgttcgtgacatgaggcagacg
gttgctgttggtgtcatcaagagcgtggagaagaaggaccccaccggtgccaaggttacc
aaggctgctgccaagaagaaatga
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