Setaria italica (foxtail millet): 101765793
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Entry
101765793 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC101765793
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101765793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101765793
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
GTPases
101765793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
GTP_EFTU_D2
EFG_IV
DUF1664
EzrA
DUF2009
Motif
Other DBs
NCBI-GeneID:
101765793
NCBI-ProteinID:
XP_022685391
LinkDB
All DBs
Position
IX:complement(10031472..10044045)
Genome browser
AA seq
1918 aa
AA seq
DB search
MQMDAETVQAAPALAAHLLNSPKPQVSKYYFKKKTSNHSSRNDRDDANHDTRIQPRSPLS
RQSLTFDTPTYNAGEHGRAYMVHHCHTHPLFFTPHSLDTXCELIWFHQEPXYEIDHEKLA
PKSPIHLKSVRVVKVSECTNLDVTVKFPSLQALRSFFSSYPASGTGPELDERFVMSSNHA
ARILRRRVAEEGLEGAVHQVNFWLVKPCLYDFAASQQAPLPPVADSCLLTTLKCDGAGWG
MRRRVRYIGRHRDEAPKEAGVDGCNTEVSVREEQQRPGTQEVTRSERNCKRKREAEGSSK
DKHRDDGNTNRKVQGGSKKKAKNRTVESRDGDPRHGKDRWSAERYAAAERSLLDIMRSRC
ARSGAPVMRHVLREEARKHIGDTGLLDHLLKHMAGRVPEGSVHRFRRRHNADGAMEYWLE
PAELAEVRRQAGVSDPYWVPPPGWKPGDDVSLVAGDLLVKRQVEELTEEVNGVKRQMEQL
VDKDGNFDAERAYSSLKEKYRSAVRANEKLEKQVFSLKDMCENVFQMNGELEEEVLSFKD
KYEHISDKNDKLEEQITYLSSSFLSFKDQLVLALKTETTRQLGLAPSDGNQEAAPRTTVY
LASDDQMTPRADGTVIQGVPDKPATATARKSSFRVCKPQPQGTFLIWPSMASGTTISGGA
SSSCPTAAATPGPGILRGTGSAGPGLPRPSRAPGIEEAASSSGLDEHLMLGALFSTPPSA
SSTYAAAKLQLSFPSPRSPLQPQKLFGTAAAAGFSPQKLLHFSGLTRLHVDTSSPSSGAC
GASLLEGKRALFNADAGGISVSVVGTELALATPSYRCETQKGKGQSQPAQGTDGHKAQNN
FSLLQFTLLPKSRAFSVFLLPSPPKTPQAQTLTTTAAMAAAERSGEAAAADPRRVRNTCI
LAHVDHGKTTLADHLVASCGDGLLHPKLAGRLRFMDYLDEEQRRAITMKSAAVALRSRSG
HRVSLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTHAALRQAFVERLRPCLVL
NKIDRLITELCLTPAEAYMRLHRIVSDVNSIYSALRSHSYFSLLSALEDNPSSSSSSSTE
DLPEDFEDDDDNEDAFQPLKGNVVFACALDGWGFRPQQFAELYARKVGVNPSAFLRGLWG
PRYLDKKTGKVVGKKAIKSADPQPMFVEFVLSALWKMYELVLNDGGESKRVKKLVENFQL
KIPERELKNKDPKVVLQSIMSQWLPLSDAVMDMVVECTPDPVAAQGFRVTRLMPKREVTP
EDDAGCPEVVAEAERVRRCVEACDVSVDAPVVVYVSKMFAVPYKMLPLKGVNGELLNHHG
ASEPEECFMAFARVFSGVLHAGQKVFVLSPLYDPLKGDAVQKHVQEVELQYLYEMLGQGL
KPVASVGAGSVVAIQGLGHHILKSATLSSTKSCWPFSSMMFQASPMLKVAIEPSNPADLG
ALVKGLKLLNRADPFVEYTVTQRGEHVLAAAGEIHLERCIKDLEERFAKVKLVVSDPLVS
FKETIEGGGVGLVERMKAPQEFAERTTPNGRCTVRVQVLRLPNALTKVLEESEQLLGQII
EGKTAKGDGVLDPRLSQDDGNSAATLRQRMIDAIDSELEAISNQVDKEKLERYRKTWLGY
LERIWSLGPWQVGPNLLLSPDAKSSDRAITIQDGRQGILVSGSSHVSERLGFVKESDTKD
NSNLDNGESAADAPESLHLESLALRNNIVSGFQIAANAGPLCDEPMWGLAFIVEPYLFAD
GSDAANHFDQYNISSGQVITAVKEACRAAVLQNKPRIVEAMYFCELTAPYDQSGSTYGVL
NKRRARILKDEMQEGTSLFTVHAYLPVAESVGFSNELRSLTAGAASALLVLSHWEAIAED
PLFIPRTQDELEEFGDGSSIGPNLAKKLMNSVRRRKGLHVEEKVVEHGTKQRTLAKKV
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggacgcagagacggtgcaggcggctcctgcgctcgcggcccatctgctgaac
tcgccgaagccacaggtgagcaagtactacttcaagaagaagaccagtaaccacagcagc
agaaatgacagggatgatgccaaccacgacaccaggatccaacccaggtcgcccctgagc
aggcagagcctgaccttcgacacccccacctacaacgctggtgagcacggccgggcatat
atggtgcatcactgccacactcacccattattcttcacgccgcactcacttgacactnag
tgtgaattgatctggtttcatcaggaacctntctacgagatcgaccacgagaagttggcc
cccaaatccccaatccatctgaaatccgtacgggtggtaaaggtgagcgagtgcacaaac
ctggacgtcacggtgaaattcccgtccctccaggcgctgcgcagcttcttctcctcctac
ccggcgtcaggcaccgggccggagctcgacgaacgcttcgtcatgagcagcaaccacgct
gcgcgcatcttgcgccgccgggtggccgaggaggggctcgagggcgcggtgcaccaggtc
aacttctggctcgtcaaaccctgcctctacgacttcgccgcgtcccagcaggcgccgctg
ccgccggtagccgactcctgcctgctcaccaccttgaagtgtgatggcgccgggtggggc
atgaggcgccgtgtcaggtacattggccggcatcgtgatgaagctcccaaggaggctggc
gtcgatggttgcaacacagaggtcagcgtcagagaggagcagcagcgtccaggcacgcag
gaagttacgaggagcgaaaggaactgtaagaggaagcgggaggcagaaggaagcagcaag
gacaagcacagagacgatggcaatacgaaccgcaaggttcagggtggcagcaaaaagaag
gcgaagaatcgcaccgtggagtccagggacggcgaccctcggcacggcaaggaccggtgg
tcagccgagcgctacgccgcggcagagaggagcctgctcgacatcatgcggtcccgctgt
gcccgctccggcgcgccggtgatgcgacatgtgctgcgggaggaagcccgcaagcacatc
ggcgacaccggcctccttgaccacctactcaagcacatggccggccgggtgccagaaggc
agcgttcaccgattccgccgccggcacaacgcggatggtgcgatggagtactggctggag
ccggccgagcttgctgaggtgcggcgacaggccggtgtgtctgatccatactgggtgcca
ccaccgggatggaagccaggtgacgacgtctccctcgttgccggcgacctactagtcaaa
aggcaggttgaggagctcaccgaggaggtcaatggcgtaaaaaggcaaatggagcagctg
gtggacaaggatgggaactttgatgcagaaagagcttacagttcattgaaggagaagtac
cggagtgctgtgagggctaacgaaaagcttgagaagcaggtgttctctttgaaggatatg
tgcgagaatgtgtttcagatgaatggtgagctggaggaggaggtgttatccttcaaggac
aagtacgagcatatatcagacaagaatgataagttagaggagcagattacctatctctcc
agctccttcctttctttcaaggatcagttggtgctggcgctgaagactgaaacaactcgt
cagctgggattggctcctagcgatggcaatcaagaagctgctccccgcacaacagtgtac
ctcgcttccgatgaccagatgaccccgcgggccgacggcaccgtcatccaaggcgtcccg
gacaagccggcgacggcgacggcgaggaagagcagcttccgcgtctgcaagccacagcca
cagggcacgttcctgatttggcccagcatggcgtccggcacgaccatcagcgggggagcc
agcagcagctgcccaaccgccgccgccacgccaggcccggggatccttcgcggcaccggt
agcgccgggccggggctcccgcggccgtcgcgagccccaggaattgaggaggcggcgtcg
tcgtcgggcctggacgaacacctgatgctcggcgccctcttctccacgccgccctcggcg
tcgtccacctacgcagcggccaagctgcagctgtcctttcccagcccgaggtcgccactg
cagccgcaaaagctgttcggcactgccgccgccgccgggtttagtcctcaaaagctgctg
catttctccggcctgactcgacttcatgtggacacctcgtccccgtcgtcaggggcctgc
ggcgccagccttctggaggggaagagggccctgttcaatgcagacgccggcgggatcagt
gtcagtgtggtgggcaccgaactggccctggctactccctcctaccgctgcgaaacccaa
aaaggaaaaggacagtcccaaccggcccaagggacggacggccacaaggcccaaaacaat
ttttccctccttcaattcacactgctcccaaagtccagagcattctccgtctttcttctt
ccttccccacccaaaactccccaagcccaaaccctaaccaccacggcggcaatggcggcg
gcggagagatccggcgaggcggccgcggcggacccgcgccgcgtccgcaacacgtgcatc
ctcgcgcacgtggaccacggcaagaccacgctggcggaccacctggtggcgtcctgcggg
gacgggctcctccacccgaagctcgccggccggctccgcttcatggactacctcgacgag
gagcagcgccgcgccatcaccatgaagtccgccgccgtggcgctccgctcccggtccggg
caccgcgtcagcctcatcgactccccgggccacatcgacttctgctccgaggtctcctcc
gccgcgcgcctctccgactcggcgctcatcctagtcgacgccgtcgagggggtgcacatc
cagacgcacgccgcgctgcgccaggccttcgtcgagcgcctccggccttgcctcgtgctc
aataagatcgaccgcctcatcaccgagctctgcctcacccccgccgaggcgtacatgcgt
ctccaccgcatcgtctccgacgttaactccatctactcagcgctgcgctcgcactcctac
ttctccctcctctccgccctcgaagacaacccctcctccagctcgtcgtcctccactgag
gatcttccagaggactttgaagacgacgatgacaatgaggacgcgttccagcccctcaag
ggcaatgtcgtcttcgcctgcgcacttgatggctggggcttccgcccccaacaattcgct
gagctctacgccaggaaggtcggagtcaacccctccgccttcctcagaggattgtggggc
ccaagatatctcgataagaagacggggaaggttgtgggtaagaaagccatcaagagcgca
gacccacagcccatgttcgtggagtttgtgctgagtgccctgtggaagatgtatgagctg
gtgctgaacgatggtggcgagagtaagagggtgaagaaattggtagaaaacttccaattg
aaaattccagaacgggagctgaagaacaaagatccgaaggtggtgctgcagtccataatg
agccagtggctgccgctgtctgatgctgtgatggatatggtggtggagtgcacgcctgac
cctgttgctgctcaagggttcagggtcacacggcttatgccaaagagggaagttacacca
gaagatgatgctggttgccctgaggttgttgcggaggcagagagggttcggaggtgtgtt
gaggcctgtgatgtaagtgtggatgcgccggtggtagtttatgtgtcaaagatgtttgcc
gtgccatataagatgttgccattgaagggagtgaatggggaactgttgaaccatcatggt
gccagtgagccagaggagtgctttatggcatttgcgagggtcttcagtggggtccttcat
gcagggcagaaggtctttgtgctatcaccactgtatgatccattgaaaggggatgcagtg
cagaagcatgtgcaggaagtggagctgcaatacttgtatgagatgcttggacagggcctg
aagccagttgccagtgtgggtgctgggagtgttgttgcaatccagggccttgggcatcat
atattgaagagcgccacattatcgtccacaaagagttgctggcccttctcaagtatgatg
ttccaggcgtccccgatgctcaaagttgcaattgagccttcaaatccagctgatctggga
gctcttgttaaagggctcaagcttcttaaccgggcagacccatttgtggagtatactgtt
acacagaggggtgagcatgtccttgctgccgcaggtgagatacatttagaacggtgcata
aaggatttggaggaaagatttgcaaaggtcaaattggtggtctcagacccccttgtttcc
ttcaaagagacaattgaaggaggtggtgttggtttagtggagaggatgaaggctccacag
gagtttgctgagaggactactccaaatgggagatgcactgtgcgagttcaggtcttgagg
cttcccaatgctctaactaaggtccttgaggaaagtgaacaattgcttggtcaaataatt
gaggggaaaacagcaaaaggggatggtgtcttggatccaaggctttctcaagatgatggt
aattctgctgcgacgcttaggcagcgtatgatcgatgccatagacagtgaattagaagca
atttccaatcaagtggataaagaaaaacttgagaggtacagaaagacatggcttggatac
ctagaaagaatctggtcactaggtccgtggcaggttggtccaaatctcctcctctcgcct
gatgcaaaatcaagtgatcgtgcgataaccatccaagatggaaggcaaggtatacttgtg
agtggtagttctcatgtctctgagagattggggtttgtgaaggaatctgataccaaagat
aacagcaatcttgacaatggtgaatcagcagcagatgctcctgaatcattgcatctagag
tctctggcactaaggaacaacattgtctcaggtttccagattgcggcaaatgctgggcct
ttatgtgatgaacctatgtggggtctggcgtttattgttgagccttacctatttgcagac
ggctctgatgctgctaatcactttgatcaatacaacatttccagtggtcaagtaatcact
gcggttaaagaagcatgccgagcagctgttcttcaaaacaaaccaaggattgttgaggca
atgtacttctgtgagttgaccgcgccatatgatcaatcaggttcaacttatggagttctt
aataagaggcgagcaaggattctgaaagatgagatgcaagaaggaacctcattgttcaca
gtgcatgcttacttgccagtcgctgagagcgttgggttttcgaatgaacttaggagttta
actgcaggtgcagctagtgctctgcttgttcttagccactgggaagccattgctgaggac
cctctctttatcccaagaacgcaggatgagcttgaagaatttggagatggttcaagcatt
gggccaaaccttgctaaaaagcttatgaattctgttaggcggaggaagggactgcatgtt
gaagagaaagttgtggagcatggcacaaaacagcggacccttgctaagaaagtatag
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