KEGG   Setaria italica (foxtail millet): 101766269
Entry
101766269         CDS       T02818                                 
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 16
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101766269
Spliceosome [BR:sita03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101766269
 Complex B
    101766269
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4
Other DBs
NCBI-GeneID: 101766269
NCBI-ProteinID: XP_004952780
LinkDB
Position
I:complement(27676951..27682408)
AA seq 759 aa
MSASATAAGRDAAGTPEAAGTATRRDKRRERKKERRRRARREAAARARVAVEADAPAADP
EEELRLLDQEEAEAAAESERARRAFEDAERRWLEAAAARAAEKAAAAAAAAEEARAAEAS
APEKSKDDHENESEEDGEWEYIEDGPAEIIWQGNEIIVKKKKVKVPKGIKEKPPIQEEDR
PTSNPLPPQSVGFASQRREPSMSAQEVLEKVAQETPNFGTEQDKAHCPFHLKTGACRFGV
RCSRVHFYPDKSSTLLMKNMYNGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFG
ELANFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWKASI
CGEYMRSRYKTCSHGVACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMVALFGPAADATH
DKASDTRDFERLQHSNRKRLKSSSDRYVPRRSMDEDVHTRYSSQDYSHSKQERSSHSMNY
EYRQHRRGSSATDRHHGQDTKTNGRQFSTKENESQVHKHKHEERRRSDHSDGGKYDKISS
RKHQSDQRGSCEPGSSDWPSDLTDTDASKGPSGGKSSSKYDDPKKSMRKSSEAHNLERRY
TAHKSAGKEHSTRRGSERGTEDDYYDEKDDGRVKSRKHKDVHNYSDDRWVATYSDGDSDV
DRYQRSSSEGTKFGGKGDAHSDAEAQHQRSSSRTKDDKRRRKSHSGNKRRSTTEEDTRDS
DTRGLSSDSCSGRSRSSEENFSTHRSKRKLSRSKEKSSS
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgtcggcctcggccacggctgctggcagagacgccgctggtaccccggaagcagcgggg
acggcgaccaggagggataagcggcgcgagcggaagaaggagcgccgccggagggcgcgg
agggaggcagcggcgcgcgcgagggtggcggtggaggcggatgcgcccgcggccgacccc
gaggaggagctccgcctcctcgatcaagaggaggccgaggcggctgcggagtccgagcgc
gcgcggcgcgccttcgaggatgccgagcgccggtggctcgaggccgccgcggcgcgcgct
gcggagaaggcagccgccgccgccgccgcggcagaggaggccagggccgcggaggcttcc
gctccagagaagtctaaagatgatcacgaaaatgagtcagaagaagatggtgaatgggaa
tatattgaagatggaccagccgagatcatatggcaaggaaatgagataattgtgaaaaag
aaaaaggttaaagtaccaaaagggatcaaggaaaagccgccaattcaagaggaagataga
cctacatcaaatccactcccgccacaatctgtaggttttgcttcacagaggagagaacct
tccatgtctgctcaagaggtacttgagaaagttgctcaagagactccaaattttggaaca
gaacaggataaggcccactgtccatttcacctcaagacaggggcttgtcgctttggagtg
cgctgcagcagggttcatttttatcctgataagtcaagcacattgctaatgaaaaacatg
tataatggtccaggccttgctttggagcaagatgaaggccttgagttcacagatgaagaa
atcgaacagagttatgaggaattttatgaagacgtacatacagaatttctgaaatttggt
gaacttgccaacttcaaggtatgtaggaatggatctttccatcttcgaggaaatgtttat
gtgcactataaatcattggattcagctcttcttgcctatagcagcatgaatggacgctat
tttgctggaaagcagataacatgcgaatttgttgctgtgacaagatggaaagcttccata
tgtggtgaatacatgaggtcaagatacaagacatgttcgcatggagttgcttgtaatttt
attcactgttttcgcaatcctggaggagattatgagtgggctgattgggataatcctcct
cctagatactggattaggaagatggttgctctttttggtcctgcggctgatgctacgcat
gacaaggcaagtgatacccgagattttgaaaggctgcaacattcaaacaggaaaagactg
aaaagttccagtgataggtacgttccaagaaggtccatggatgaagatgtgcatacgcga
tattcttcccaagattattcacattctaagcaagaacgcagtagccacagcatgaattat
gagtacaggcagcatagaagaggttcttcagccacagatagacaccatgggcaagatact
aagactaatggcagacagttctcaacaaaagaaaatgaaagtcaggtccataagcacaag
catgaggaaaggcgcagaagtgatcatagtgatggaggaaaatatgacaaaattagttct
aggaagcaccagtctgatcagcgtggaagttgcgaacctggttcttctgattggccttca
gacttaactgatacagatgccagcaagggcccttcaggcggcaaatccagtagcaagtat
gacgatccgaaaaagagcatgaggaaatcctcagaggctcacaatcttgaaagacgttat
acagcgcacaaatcagcaggaaaagaacacagcaccagaaggggctctgaacgtggcaca
gaagatgactattatgatgagaaagatgatggaagagtgaaatctagaaagcacaaggat
gtccacaattactctgatgacaggtgggttgctacatatagcgatggtgattcagatgtt
gatagatatcagaggtcaagtagtgaaggcacaaagtttggtgggaagggagatgctcat
tcagatgcggaagctcagcatcagagatcaagcagcagaacaaaggatgataagcgtaga
aggaagagtcacagtggaaacaagcggcgtagcacaacagaagaggataccagagattct
gacactagaggtttgagctctgattcgtgtagtggtagatcaagaagcagtgaggagaat
ttttcaacgcacagatcaaagaggaagctaagtaggagtaaggagaagtcgagtagctag

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