Setaria italica (foxtail millet): 101772100
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Entry
101772100 CDS
T02818
Name
(RefSeq) homeobox-leucine zipper protein ROC4
KO
K09338
homeobox-leucine zipper protein
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101772100
Transcription factors [BR:
sita03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
101772100
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101772100
NCBI-ProteinID:
XP_004978185
UniProt:
K3Y5A8
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Position
VII:complement(27549747..27555437)
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AA seq
793 aa
AA seq
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MSFGDLLGGAGDAAGAPYPPYGVFASSPALPLAVADAGRRRGGSGERAGSVAHGGGNAKD
APEADDGSRSPIGDHIDVVLVCGGGEDDDEDGEAANPRKRKKRYHRHTPQQIHQLEAVFK
ECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKNQMERHENALLKQENDKLRAENLS
IRGAMRDTVCGGCGGPALLGDMSLEEHHLRLENARLRDELTRVCALTAKFIGKPISTMAL
APVQQLHPMPGSSLDLAVTCVGSVPPSTMPVSTISELAGSVSSQMGTVITPMATAPSAMT
SIDKSMFVQLAMRAMDELVKMAQMNEPLWVPSVSSPGSPTMETLNWKEYSKTFSPCVGLK
PIGFVSEASRESGIVAIDSAALVEFFMDEVRWSDMFSCIVAKASTIEEISAGAVGSRDGA
LLLMQAELQVLSPLVPRREVTFLRFCNQLAEGVWAVVDVSIDGLERDQCLVTNMNCRRLP
SGCVVQEIPNGCKVTWVEHTEYHEASVHQLYQPLLCSGLAFGAGRWLATLQRQCECLAIL
MSSVAVPEHDSSAVPLEGKRSLLKLAHRMMENFGAGVSGSSAEWSKLDGLTGSMRKDVRV
MVRNSVDEPGVPPGVVLSAATAVWMPVTPERLFNFLRNEGLRAEWDILSNGGPMQQIVRI
AKGQLDGNSVTLLRADHTNTHLNSILILQETCTDKSGAMVVYAPVDFPAMQLVMGGGDST
NVALLPSGFAILPGRSCTGGVGHKTSGALLTVAFQILVNSQPTAKLTMESVDTVYSLISC
TIEKIKAALHCEV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcggcgatctcctcggcggtgccggggacgcggccggcgcgccgtaccccccg
tacggcgtcttcgcgtcgtcgccggccctccccctcgccgtggccgacgccgggcgccgc
cgcggcgggagcggcgagcgggcgggttcggtggcccacggcggcgggaacgcgaaggac
gcgccggaggcggacgacggcagccggtcgccaatcggcgaccacatcgacgtcgtcttg
gtttgcggcggcggcgaggacgacgacgaggacggcgaggccgcgaacccgcgcaagcgc
aagaagcggtaccaccgccacacgccgcagcagatccaccaactcgaagcggtgttcaag
gagtgcccccacccggacgagaagcagcgcgccgagctgagcaagcgcctgggcctggag
ccacggcaggtcaagttctggttccagaaccgccgcacgcagatgaagaaccaaatggag
aggcacgagaacgcgctgctgaagcaggagaatgacaagctgcgcgccgagaacctgtcc
atccggggggccatgagggacacggtgtgcggtggctgtggcggcccagctttgctcggg
gacatgtcactggaggagcaccacctgcgcctcgagaacgcgaggctcagggacgagctc
acccgagtctgcgccctcacggccaagttcatcggcaagcccatttctaccatggcgctg
gcgcccgtgcagcagcttcatcccatgccaggctcgtcactggaccttgcagtcacttgt
gttgggtctgtgccaccaagcacaatgcctgtctcgacgatctccgagcttgctggcagc
gtgtccagccaaatgggcacggtgatcacgcccatggcgaccgcaccatcagcgatgact
agtattgacaagtccatgttcgttcagctagcgatgagggccatggatgagcttgtcaag
atggcgcagatgaatgagcccctgtgggttccaagtgtttcctcacctggctcaccaacc
atggagacgctgaactggaaagagtactcgaagacattctcgccatgcgttgggctgaag
cctattgggtttgtgtctgaggcctcgagggagtctggcattgtcgccattgacagcgct
gctcttgtggagttcttcatggatgaggtacggtggtccgacatgttctcttgcattgtt
gccaaggcatcgactattgaggaaatctcagctggggctgtgggaagcagagatggtgca
ttgctgcttatgcaggcagagctacaagtgctttcacctcttgtccctagaagggaggtg
acatttcttaggttctgcaatcagcttgctgagggtgtgtgggctgtagtggatgtttcc
attgatggactggagagggatcagtgcctagttacaaacatgaattgccgcaggctgcct
tcaggttgtgtggtgcaagagatccccaatggctgcaaggtcacatgggttgagcataca
gaataccatgaggcatccgtgcaccagctctaccagcctcttctgtgctctggcctcgcc
tttggtgcagggcggtggcttgcaacactgcaacgccagtgcgagtgcttggctatcctg
atgtcatcagttgcagtgccagagcatgactcatcagcggttccgctggaagggaaacgg
agcttgttgaagttggcacataggatgatggagaacttcggtgcaggggtgagtggatca
tctgcagaatggagcaaactggatggcttaacaggcagcatgcggaaagatgttcgtgtc
atggtacgaaatagtgtggatgaacctggtgtgccaccaggtgtggtgctcagtgccgcc
acagcagtctggatgcctgtgacacctgagcggctcttcaacttccttcgcaacgagggg
ctgcgtgctgaatgggacatcctcagtaacggcggccctatgcagcagattgtacgcatt
gccaaggggcaactggatggcaactctgtaactctactgagagctgatcatacaaacacg
cacctgaacagcatcttgattcttcaagagacgtgcaccgacaaatctggtgcgatggtt
gtctatgccccagtggacttcccggcaatgcagcttgtgatgggtggaggggactcgact
aatgtggcactcttgccatcaggtttcgccattctgcctggcaggtcttgcactggtgga
gttgggcacaagacaagcggagcgctgctcaccgttgcattccagatccttgtcaacagc
cagccgaccgcaaagctcaccatggagtcagtagacactgtttacagcctcatctcctgt
accatcgagaagatcaaggcagcgcttcactgcgaggtctga
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