Setaria italica (foxtail millet): 101773940
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Entry
101773940 CDS
T02818
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101773940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101773940
Spliceosome [BR:
sita03041
]
Common components
Common spliceosomal components
SR proteins
101773940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
101773940
NCBI-ProteinID:
XP_004967504
UniProt:
K3XKV7
LinkDB
All DBs
Position
V:complement(2172311..2178291)
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AA seq
272 aa
AA seq
DB search
MKTMSRRNSRTIYVGNLPGDIREREVEDLFYKYGQILDIDLKIPPRPPGYAFVEFEDPRD
ADDAIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDYRVMVTGL
PSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSLFRNAFS
RAYIRVREYDARSRSRSRSRSYSRSPSYSRSRSPKSVSWSPSPVDERSLSRSRSPVSSPS
RGRSASRSPRSRSASRSRSPVRSDSTREPLKR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgagcagacgtaacagccggaccatctatgtaggcaacctccctggggac
atccgtgagagggaggttgaggatctcttctacaagtatggtcagattttggatattgac
ctgaagatacctccaagacctcctggatacgctttcgttgagtttgaggatccacgtgat
gctgatgatgcaatttatgggcgtgatgggtataactttgacggctacaggctgcgggtt
gaattagctcatggtggaagaggtcagtcttactcttatgatcgttcaagcagctatagc
agcgcacgccgtggaggtgtttctaggcgttctgattaccgtgttatggttactggttta
ccttcatcggcgtcgtggcaagatctgaaggaccacatgcgacgtgctggtgatgtttgt
ttctctgatgtataccgtgaagccggagaaactattggaattgtggattatacaaactat
gatgacatgaaatatgcgattaggaagcttgatgactccctgttcaggaatgcattttca
agggcatatatcagagtgagggagtatgatgctagatcacgaagcagaagccgtagccgc
tcgtactcgagaagccccagttacagcaggagcaggagtccaaaatctgtttcctggtca
ccatcacctgtggatgaaagatcgctatctagatcccgatcccctgtctcttctccttct
cgtggaagatctgcaagcagaagccccaggagcagaagcgcatcccgttcccgttctcct
gtgagatctgattcaactagggaacccttgaagcggtga
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