Setaria italica (foxtail millet): 101777438
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Entry
101777438 CDS
T02818
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101777438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101777438
Spliceosome [BR:
sita03041
]
Common components
Common spliceosomal components
SR proteins
101777438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
101777438
NCBI-ProteinID:
XP_004984424
UniProt:
K4ADF6
LinkDB
All DBs
Position
IX:complement(46746348..46750731)
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AA seq
285 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
AIAGRDGYNFDGHRLRVEPAHGGRGNASSHDRGSGGFGGGARRGVSRHSEYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRA
YIRVKEYDGKRGRSDSRSRSPSRSYSRSRSPSKSPRARRSASRSRSRSVSSRSRSPSKGR
SPSRSPARSKSPNASPANGEAAASPKKQSPSRSPSGSRSPDAKPE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgctggagccgcacgatctacgtcgggaaccttcccggcgacatccgggag
cgggaggtggaggatctcttctacaagtatgggagaattgttgacattgacttgaaggtc
cccccgaggccacctggttatgcttttgttgagtttgaagatcctcgtgatgctgaggat
gcaattgctgggcgggatggatacaattttgatggacaccgcctaagagtggaacctgct
catggtggtagaggtaatgcttcctcacatgatcgtggttcaggtggctttggtggtggg
gcacgccgtggtgtgtcaaggcactcggagtatcgtgttcttgtcactggactgccttct
tctgcatcatggcaggatctgaaggatcatatgcggaaggctggagatgtttgtttctct
gaagtttaccgtgaaggcggtggcaccgtaggaattgtggactacacaaactatgatgac
atgaaatatgcgataaagaagctggatgatactgaattcaggaacgcctttgggcgagct
tatataagggtgaaggaatatgatggcaaacgtggtcgctccgactcacgtagccgaagc
ccaagtcgtagctacagcagaagcaggagcccgagcaaatcacccagggctcgccgctca
gcatctagatcccggtctaggtctgtttcttcccgttcaaggtctccatcaaaaggccgt
tctccgtcaagatcaccagcaagatccaaatctcctaatgcttctccggcgaatggtgaa
gcagcagcaagccccaagaagcagagcccaagcagaagcccatcaggctcccgctcccct
gatgcgaagcctgagtag
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integrated database retrieval system
