Setaria italica (foxtail millet): 101778368
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Entry
101778368 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101778368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101778368
03036 Chromosome and associated proteins [BR:
sita03036
]
101778368
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101778368
Coactivators
SAGA/TFTC/STAGA complex
101778368
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101778368
STAGA complex
101778368
TFTC complex
101778368
SAGA complex
101778368
SLIK complex
101778368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
LptF_LptG
Motif
Other DBs
NCBI-GeneID:
101778368
NCBI-ProteinID:
XP_022685619
LinkDB
All DBs
Position
IX:complement(24761..29238)
Genome browser
AA seq
502 aa
AA seq
DB search
MDAPLPSQPEAAAAAPPPSTSASAPSPAPPPNPPTSAASAAPSSDSTITTHTPNPGTATN
PAQTLEAPVPSPAAARPPPPRMRPPYTHLASPITMSSASSAATAAASSSASVLSSSSLAP
PVPRGGVVIGVPAPRPAQTPAGYTGFVPPPSLAHQFGSMHRGLDQPPPPSSQFRQPSPGI
QNIGMVGSLSTSQMRSGIISGPQQPRPGLPSSTTPIPSGSQMPGSQRTPSHALMRPMSVS
SPSPSPALQQTPQNSSTFRPQQRPQVPQPRPQQSAPVTPHQQNVISAQQQQLPHNQLLQQ
QQQKQQQQSSSQQTQQNTTPKNQQQHSQQQAARTPVTMTQKPDSPAIAKATVLQSVDTAA
TDANVSETGTRLLNKRSIHELVAQIDPNEKLDPEVEDVLMDIAEDFVESVTTFACSLAKH
RKSNTLEAKDVLLHAERSWNITLPGFSGDEIKLYKKQHINDIHRERLALIKKSMATDXQK
NSTQAATNQKNQTPKPPAPASP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacctctgccctcgcaaccggaggcagcggcagcggcgccgccgccctcgacc
tcagcttctgctccctctccagcgccaccacctaacccaccgacttccgccgcctctgca
gcaccctcttccgactccaccatcaccacccataccccgaacccgggtaccgcaacaaac
cccgctcaaactctagaggcccctgttcccagccccgctgctgcgcggccgccgccgccg
cgaatgaggcctccttacacccacctggcctcgccaatcacgatgtcctcagcctcctct
gctgccacagctgctgcctcctcctcggcttccgttctgtcctcttcctccttggcaccc
cctgtgccaaggggaggggttgttattggggtgcctgcgccgcgtcccgcacagacgccc
gctggttacaccgggttcgtgccgccgccttcccttgcccaccagtttggatcgatgcat
cgtggccttgaccagcccccaccgccatcttcacagtttaggcagccttcccctggaatt
caaaatattgggatggttggatcccttagcacatcccagatgcgatcaggaataatatct
ggtccgcagcagccaagacctggccttccatcatcaacaactccaattccatctggaagc
caaatgcccggatcacagagaaccccctcccatgctttaatgaggccgatgtctgtgagt
tctccttctccttcccctgcgttacagcaaactccacaaaattcatcaacatttagaccg
caacaaaggccacaagttccacaaccaagaccacaacaatctgcacctgtgactccacat
caacagaatgtaatttcagcacagcagcagcaactaccacacaatcagcttttgcagcag
cagcagcaaaagcaacagcagcaaagttcctcgcaacaaactcaacagaatacaacaccc
aaaaatcagcaacagcattctcagcagcaagctgctcgtactccagtgacaatgacacag
aagcctgattcgcctgctatagcaaaagctactgttttgcaatctgtggatacagctgca
actgatgcaaatgttagtgaaactggcactcgactactcaacaagagaagcatacatgaa
ttagttgcacagattgatcctaacgaaaagctggatcctgaagttgaagatgttcttatg
gacatcgctgaagattttgttgagtctgtcactacatttgcttgttctttagcaaagcat
aggaagtcaaacaccctagaagcaaaagatgtactcctccatgcagagagaagctggaat
atcaccttgccaggcttcagcggggacgaaatcaaactatacaagaaacagcacataaat
gatattcacagggagaggcttgctctgatcaagaagtcaatggcgactgacnnacaaaaa
aactccacccaagctgcaacgaaccagaaaaatcagactcccaaaccacctgcccctgct
tccccgtga
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