Setaria italica (foxtail millet): 101783081
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Entry
101783081 CDS
T02818
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101783081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101783081
03016 Transfer RNA biogenesis [BR:
sita03016
]
101783081
03012 Translation factors [BR:
sita03012
]
101783081
04131 Membrane trafficking [BR:
sita04131
]
101783081
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101783081
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101783081
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
101783081
Translation factors [BR:
sita03012
]
Eukaryotic type
Elongation factors
101783081
Membrane trafficking [BR:
sita04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
101783081
Exosome [BR:
sita04147
]
Exosomal proteins
Proteins found in most exosomes
101783081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
101783081
NCBI-ProteinID:
XP_004962269
UniProt:
K3Z668
LinkDB
All DBs
Position
III:complement(23414949..23417807)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELITKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtcccacatcaacatcgtggtcattggccacgtcgactccggcaag
tcgaccaccaccggccacctgatctacaagcttggaggtatcgacaagcgtgtgatcgag
aggttcgagaaggaggccgctgagatgaacaagcggtccttcaagtacgcgtgggtgctt
gacaagctcaaggctgagcgtgagaggggtatcaccattgatatcgccctgtggaagttc
gagaccaccaagtactactgcacagtcattgatgcccctggacaccgtgatttcatcaag
aacatgatcactggtacctcccaggctgactgtgctgtccttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctccttgct
ttcacccttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactccaaggcccgctatgatgagattgttaaggaagtctcctcctacctgaagaag
gtgggttacaaccctgacaagattgccttcgtcccaatctctggttttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggcccaaccctgcttgaggctctt
gaccagatcaacgagcccaagaggccttcggacaagcccctccgtcttccccttcaggat
gtgtacaagattggtggtattggaaccgtccctgttggccgtgttgagaccggtatcatc
aagcctggtatgcttgtcacctttggtcccactggcctgactactgaggtgaagtcagtt
gagatgcaccacgaggctctccaggaggcccttcctggtgacaacgttgggttcaacgtg
aagaacgttgctgtgaaggatctcaagcgtgggtttgtggcctccaactccaaggatgac
cctgccaaggaggctgccagcttcacctcccaggtcatcatcatgaaccaccctgggcag
atcggcaatggctacgccccagtgctggactgccacacctcccacattgctgtcaagttt
gctgagctcattaccaagatcgacagacgatccggtaaggagcttgagaaggagcccaag
ttcctgaagaatggtgatgctggtatggtgaagatgattcccaccaagcccatggtggtg
gagaccttctctgagtaccctcctcttggtcgttttgctgtccgtgacatgaggcaaacg
gttgctgttggagtcatcaagagtgtggagaagaaggacccaacaggcgccaaggtgacc
aaggctgcagccaagaagaaatga
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