Shewanella japonica: SJ2017_1863
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Entry
SJ2017_1863 CDS
T04959
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sja
Shewanella japonica
Pathway
sja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SJ2017_1863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_1863
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SJ2017_1863
RecFOR pathway proteins
SJ2017_1863
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ARD22168
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All DBs
Position
2231192..2231809
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AA seq
205 aa
AA seq
DB search
MIGRLSGLVVEKQAPEIVLDVNGVGYELQVPMTSFYELPELNQQAMLFTHFVVREDAQLL
YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAAEFVNCVERDDIVTLVKLPGVGKKT
AERLVVEMRGKLKSLLEASVGSEREFALQSNYKPAAVENNAEEDAIAALVSLGYKPAQAS
KAVLSAYTDGMSSEVLIKAALKSML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggaagattaagtgggttggttgttgagaaacaagcaccggaaatcgtgttggat
gtaaatggtgtaggttatgagttacaggtacctatgaccagtttctatgagctccctgag
ttaaatcaacaagcaatgttattcacccactttgtggtgcgtgaagatgcacagctttta
tatggttttataaccaagcaagagcgggcgttatttaggttattaattaaaactaacggt
gttggtcctaaactcgccttaacaatattgtctggtatgacggcggctgagtttgttaat
tgtgtcgaacgagatgatatagtcactttagttaagttacctggagtcggtaaaaaaacg
gcagagcgtttagtggttgagatgcgaggtaagcttaaaagcttactagaggcctccgtt
ggatctgagcgcgagtttgctttacagagtaattataagccagcagctgttgaaaacaat
gcagaagaagatgccattgcagcacttgtttctctaggctataaacctgcacaagcgagt
aaagctgtattaagtgcatacactgacggtatgagcagcgaagtcctgattaaggctgca
ttaaagtcaatgctataa
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integrated database retrieval system
