Shewanella japonica: SJ2017_2432
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Entry
SJ2017_2432 CDS
T04959
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sja
Shewanella japonica
Pathway
sja00020
Citrate cycle (TCA cycle)
sja00785
Lipoic acid metabolism
sja01100
Metabolic pathways
sja01110
Biosynthesis of secondary metabolites
sja01120
Microbial metabolism in diverse environments
sja01200
Carbon metabolism
sja01210
2-Oxocarboxylic acid metabolism
Module
sja_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sja_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SJ2017_2432
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SJ2017_2432
Enzymes [BR:
sja01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SJ2017_2432
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ARD22722
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All DBs
Position
complement(2893795..2896617)
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AA seq
940 aa
AA seq
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MHQGIMKAWLESSHLSGSNSTYVEEMYEAYQEDPSSVSEDWQVVFDNLPAVNGTSQDIPE
TAHSKVRDYFRSLALEGRAKGASRVTDPELDAKQVKVLQLINAHRFRGHQNANLDPLGLW
QRESVSELDPAFHGLDAEDMQREFNTGSFAYGSDTLKLADIVKALKSTYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDISTKKRILEGLNAAEGMEKYLGAKFPGAKRFSLEGGD
ALVPMMREILYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHDEVQGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVIGSVRARQDRRGCKDGLQVMPIT
IHGDSAITGQGIVQETFNMSQARGFKVGGSIRIVINNQVGFTTSNHEDVRSTEYCTDIAK
MVQAPIFHVNADDPEAVAFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADRLIEESSISADDVTGLVNTYRDSLDAGDCVVKEWRPMTLHTVDW
TPYLNREWDESYQASMELERLNNLAQKIVDIPESHKLQSRVAKIYKDRVSMADGEKPVDW
GFAETLAYASILEDKKRVRITGQDSGRGTFFHRHAVLHNQNDGTTYLPLRNVADEQGEID
ITDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFVNCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSTLDELANGSFQSVIGELDALDASKVERVVFCSGKVYFELLDKRR
KQEITNIAILRVEQLYPFPQEEMQAALADYQHVKDFVWCQEEPQNQGAWYCSQHHFWAAI
PAGAQLTYAGREASAAPACGYPALHARQQEELINSALKLS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcttggctcgaatcgtcacatttaagtggctctaattcg
acctacgtagaagagatgtatgaagcctatcaagaagatccaagttcagtttctgaagac
tggcaagttgtttttgataatctccctgcggtaaatggtacttctcaagatatacctgaa
actgcacactctaaagtacgtgattatttccgcagtttagcattagaaggtcgagccaaa
ggcgccagccgtgtaaccgatcctgaattagatgctaaacaagttaaagttctccagtta
atcaatgctcaccgttttcgtggtcaccaaaatgccaatctcgatccattagggttatgg
cagcgtgagtcagtatctgaattagacccagcgtttcatggtctagatgctgaagatatg
caacgtgaattcaatacaggttcgtttgcatacggtagcgacacattgaaattagccgac
atcgttaaagcacttaagagcacttactgtggctcaattggtgctgagtacatgcatatt
actgatacggatgaaaagcgttggattcaacaacgtcttgaaccatctttaggtaaagct
aattacgacatcagcaccaaaaaacgtatcttagaaggcctaaatgctgctgaaggtatg
gaaaaataccttggcgcaaaatttccaggcgcaaaacgtttttctcttgaaggtggcgat
gcattagtaccaatgatgcgcgaaattttataccgcgcaggtgaagctggaacgaaagaa
atcgtagttggtatggctcaccgtggtcgtttaaacgtacttgttaatgtactgggtaaa
cgtcctgcagaactatttgatgaattcgctggtaaacacgatgaagttcaaggctctggt
gacgttaagtatcaccaaggtttctcatcagattttgaaacaccaggtggtaatgttcat
ttagccttagcgtttaacccatctcaccttgagattgttaatcctgttgttattggctct
gttcgtgctcgtcaagacagacgtggttgtaaagatggcttacaagttatgccaattact
atccatggtgattcagcaataacaggccaaggtattgttcaagagacattcaacatgtct
caagctcgtggctttaaggttggcggttcgattcgtattgttattaacaaccaagttggc
tttaccacttctaaccatgaagatgtgcgttctacagagtactgtactgacatcgctaaa
atggtgcaggcacccattttccacgttaatgctgacgatccagaggctgttgcctttatt
tctcagttagcagtggattaccgtaatgaatttaaacgtgacgtcgtcattgatttagtt
tgttaccgtcgacatggtcacaacgaagctgatgaaccaagtgcaacgcagccgttgatg
tatgcaaaaatcaaaaaacatcctacgccacgtaagatatatgccgatcgattaatcgaa
gaaagcagcatctctgctgatgatgttactggtttagttaatacttaccgtgactcatta
gatgccggtgattgtgttgttaaagaatggcgaccaatgacgttacatactgttgactgg
acgccataccttaaccgtgagtgggacgaaagctaccaagcgtcaatggaacttgagcgt
ttaaataatttagcgcaaaagatcgttgatatccctgaaagccacaaattacagtctcgt
gtcgctaagatttacaaagaccgcgtatctatggccgatggtgaaaaaccagttgattgg
ggttttgctgaaaccttggcttatgcgtcaatcttggaagataaaaaacgtgttcgtatt
acaggtcaagattctggccgtggtactttcttccatcgtcatgcggtccttcataatcaa
aatgacggtaccacttatttgccattacgtaatgtggctgatgagcaaggtgaaattgat
attactgactcagtattatcagaagcatcagtactggcatttgaatacggttacgcaaca
gctgagccaggtggtctgactatttgggaagcccagtttggtgactttgttaactgtgcc
caagtggtcatcgatcagttcttatcatctggtgagcaaaagtggggccgtttatgtggt
ctaactatgttgctacctcatggttatgaagggcaaggtcctgagcattcatcggcacgt
ctagaacgtttcttacaactttgtgcaaaccataatatgcaagtgtgtgttccttctacg
cctgcacaggtttatcacatgttgcgtcgtcaagttgtacgtcctatgcgtcgtccactt
gttgttatgtcgcctaaatcattattgcgtcacccattagctgtttcaactttagatgaa
ttagctaacggaagtttccaaagtgtcattggtgaacttgatgcattagatgcaagcaaa
gtagaacgcgttgtcttctgtagcggtaaagtgtatttcgagttactcgacaagcgtcgt
aagcaagaaattaccaatattgctattttacgtgtggaacaactgtacccgttcccacaa
gaagaaatgcaagcagcacttgctgattatcagcatgttaaagattttgtatggtgtcag
gaagaacctcagaaccaaggtgcttggtattgtagccaacatcatttctgggcagcgatt
ccagctggagctcaattaacttatgcgggccgtgaagcatctgctgcaccagcttgtggt
tatccagcgcttcatgctcgccagcaagaagaattaatcaatagcgcattaaaactgtcg
taa
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